Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq22 161 2e-34
seq3 132 1e-25
>seq22
Length=92557
Score = 161 bits (178), Expect = 2e-34
Identities = 178/237 (75%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||| | ||||| ||||||||||| ||||| |||| | |||
Sbjct 77005 TCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGT 77064
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || || || | || |||||| ||||| ||||| ||
Sbjct 77065 TCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACC 77124
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| || || |||||||| ||||| ||||| || || || || |
Sbjct 77125 TTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAA 77184
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGT 195155
||| | ||||| || ||||| ||||| ||||| | ||||||| || |||||||
Sbjct 77185 GGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT----GTGACTTGGT 77237
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||| | ||||| ||||||||||| ||||| |||| | |||
Sbjct 76777 TCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGT 76836
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || || || | || |||||| ||||| ||||| ||
Sbjct 76837 TCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACC 76896
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| || || ||||| || ||||| ||||| || ||| || || |
Sbjct 76897 TTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAA 76956
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || ||||| ||||| ||||| | ||||||
Sbjct 76957 GGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
>seq3
Length=600384
Score = 132 bits (146), Expect = 1e-25
Identities = 163/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||| | ||| || || ||||| || ||||| |||| | |||
Sbjct 22034 TCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGT 21975
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || ||||| | || |||||| ||||| || || ||
Sbjct 21974 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCC 21915
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| || || ||||| |
Sbjct 21914 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAA 21855
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| | || || || || | ||||| || || | |||||||
Sbjct 21854 AGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 21812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481074036379
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |