Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq37 403 2e-107
>seq37
Length=3023111
Score = 403 bits (446), Expect = 2e-107
Identities = 641/911 (70%), Gaps = 9/911 (1%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || || | ||||||||||||||||||||| || || || | || || |||
Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||||||||||||||| | ||||| || | ||||||| || || | | | |
Sbjct 2627549 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2627490
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| ||| || || ||||||| || |||| ||||| | |||||||||||| | ||
Sbjct 2627489 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2627430
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|||| || | |||||| |||| ||||||| ||| || | ||||| || | |||||
Sbjct 2627429 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2627370
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969
| |||| | | | | ||| | | | | ||| ||||| ||| |||||||||
Sbjct 2627369 CTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCAAAA 2627310
Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029
||| |||| || || || | || ||||||||||| ||||| || || || |||||
Sbjct 2627309 TCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGCATT 2627250
Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089
| |||||| || || |||||||| || |||||||| |||||| || || ||||| ||
Sbjct 2627249 AATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCCTCA 2627190
Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATTT 19148
|| || ||||||||||| | ||| || || ||| | ||||| || ||||||||| |
Sbjct 2627189 ACAGCAGCAAAAGCAACCAATCTCTCAGCA-AACAATGCATCGGAATCTTGAATCCATCT 2627131
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
| |||||||||||||||||||| | || || || || |||| ||| |||| | |
Sbjct 2627130 GATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA-AGA 2627072
Query 19209 CATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
|| || || | || ||| || | ||| | || |||||||| || |||||||||
Sbjct 2627071 AATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGAAT 2627012
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
|||| ||||| || || || || || ||||| || | ||||| | || || ||||
Sbjct 2627011 GAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAACTT 2626952
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
|| | |||| |||| ||||| ||||||||||| || |||||| || || ||||| |
Sbjct 2626951 CAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAAGG 2626892
Query 19388 CTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT-AATGTAT---TCCAATCATTA 19443
| || | | ||| ||| |||||| || || ||| | | ||||||||| |
Sbjct 2626891 CCAAGATTCTTCCAATGAAAAACCTTTCAT-TGTCATTCAATTTCTCTCTCCAATCATGA 2626833
Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503
| ||||||| |||||| | |||||| | ||||| || || || || || || || |||
Sbjct 2626832 AGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTAC 2626773
Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTA 19563
|| | ||| || ||| | ||| |||||||| || ||| | | | ||| ||||| ||
Sbjct 2626772 ATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGTTTTCCTTC 2626713
Query 19564 AGAATAGGTTC 19574
| || |||||
Sbjct 2626712 AAAAGTGGTTC 2626702
Score = 304 bits (336), Expect = 1e-77
Identities = 1178/1854 (64%), Gaps = 55/1854 (3%)
Strand=Plus/Plus
Query 47019 AAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAAT 47078
|| || |||||||| |||||||| ||| |||||||||| || ||||| || || |||
Sbjct 2501078 AAGTAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAAT 2501137
Query 47079 TTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCA 47138
||| | || ||| || ||||| || | ||||| || || || ||||||
Sbjct 2501138 TTACCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCA 2501197
Query 47139 CCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAA 47198
||||||||| |||||||| | ||| | |||| | || ||||| || ||||| ||
Sbjct 2501198 GCTCTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTAC 2501257
Query 47199 ATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTCCgttttctata 47255
| | || || || ||||| | || | | |||||| || || |||| |||
Sbjct 2501258 AATGCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATA 2501317
Query 47256 attttgttttttaat---tcatttgaccaaagttttcgttcagttaatgtttttaaAAGA 47312
|| | | || | ||||| ||||| | | ||| || ||| || |
Sbjct 2501318 ATGCTACTCTTCATAGCGTCATT---CCAAATTCCTAAATCAACCAAATCTTTCAACAAG 2501374
Query 47313 TGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTA 47372
| ||||||||||||||||| || |||| | ||||| | || ||||| ||
Sbjct 2501375 TATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTG 2501434
Query 47373 TATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGAT 47432
||||| || | | ||||||| || || |||||||| | || || || |||||||| |
Sbjct 2501435 TATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGA 2501494
Query 47433 GCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAA 47492
|| || || ||| ||||| | || | ||| | || | ||||
Sbjct 2501495 GCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAA 2501554
Query 47493 TCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATC 47552
||||| | || | ||| ||||| || || ||||| | | |||| |
Sbjct 2501555 TCCCACAATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCT 2501614
Query 47553 GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCC 47612
|| || || | || |||| ||| ||||| | | || | |||| ||||||
Sbjct 2501615 GGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCA 2501674
Query 47613 AATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGAT 47672
| ||| || ||| ||||||||||| |||| || || | | ||| |||||| ||
Sbjct 2501675 ACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAA 2501734
Query 47673 TCAAAAG-GATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAAT 47731
||||| ||| |||| ||| ||||| ||||| ||||| | ||||
Sbjct 2501735 TCAAATCCGAT-TCTCAAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAAT 2501793
Query 47732 TGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTAT 47791
|||||| || | | || || ||||||||| || | ||| || | |||| ||| ||
Sbjct 2501794 TGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAAT 2501853
Query 47792 AATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAAT---C 47848
| | |||| | | |||| || | | | || || | |
Sbjct 2501854 GACTCTATTCAAATTACGTGTA---------ACAACTTTGGTGACGTCATGCAACTTGTC 2501904
Query 47849 AAACTTGTTAT-----TTATAACAAACCT-----ATTAA-----GT---GCTATAGATGC 47890
||| |||| | | || | ||| || || || || || || ||
Sbjct 2501905 AAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGC 2501964
Query 47891 TAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATT 47950
| ||||| ||||| || |||| ||| | ||||| | |||||| ||| | ||
Sbjct 2501965 CAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTT 2502024
Query 47951 ACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTA 48010
| |||| ||| ||||||||||| || || ||||||| || ||||||||
Sbjct 2502025 GGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTA 2502084
Query 48011 AAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT 48070
| ||| || || || ||||| || | || | || | ||| || | ||| | |
Sbjct 2502085 CAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTG 2502144
Query 48071 AGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAA 48130
||| || || |||| | | || | |||||||| ||| |||| ||||
Sbjct 2502145 AGCTTTGATTGTTTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAA 2502204
Query 48131 TTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATC 48190
||| || ||||| || | | || ||| |||||| ||| | | ||||| ||||||
Sbjct 2502205 TTCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATC 2502264
Query 48191 CTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATC 48250
||| | | ||||| ||||||| | |||||| ||||| | |||| || || ||
Sbjct 2502265 ACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTC 2502324
Query 48251 CCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATC 48310
|||| ||| | |||||| || ||| ||| || ||| ||||| ||||| | |||||
Sbjct 2502325 TCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATC 2502384
Query 48311 AGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATC 48370
||| ||||||||||| | ||||| || | ||||||||| || ||||| ||||||||
Sbjct 2502385 AGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATC 2502444
Query 48371 TATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACC 48430
| ||| | ||||| ||||| |||| | | |||||| | |||||||||||| ||||
Sbjct 2502445 CACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACC 2502504
Query 48431 ATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATAC 48489
||||| || | || || ||| | | | || || || || ||| || ||||
Sbjct 2502505 GTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAAT-CCAATAC 2502563
Query 48490 CACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATAC 48549
|||| || |||| || || | ||||| || | || |||||||| ||||| |||
Sbjct 2502564 CACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAG 2502623
Query 48550 TATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAAT 48609
||| ||| |||| | | |||||| |||||||| || | ||| || | ||
Sbjct 2502624 AATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCAT 2502683
Query 48610 TAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAA 48669
| || || |||||| ||||| |||| || | | || | ||| || || || ||||
Sbjct 2502684 TGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAA 2502743
Query 48670 TAACAGAATCT----ATATCCCATTGATGTATACCTATAGATACACGCATTAACATATAT 48725
|||| ||| ||||| | | ||| ||||| |||| || | ||| | || | |
Sbjct 2502744 TAAC----TCTTGGGATATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGT 2502799
Query 48726 TGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTA 48785
|| ||||||||| ||| ||| ||| || || | ||||||| | ||||| |||||
Sbjct 2502800 TGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTG 2502859
Query 48786 AAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTA 48837
|| ||||| || ||||| ||||| || |||| || ||||| ||| ||||
Sbjct 2502860 AATCCAAAGTAATTGTAGTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2502911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108540024680
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