Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq37 205 5e-48 >seq37 Length=3023111 Score = 205 bits (226), Expect = 5e-48 Identities = 357/512 (70%), Gaps = 8/512 (2%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| || ||||||| |||||||||||||| | | |||||| |||||||| Sbjct 2502241 ATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGG 2502300 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||||| || || || ||||| ||||| |||||||| || || || |||||| | Sbjct 2502301 GATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2502360 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | || | ||| ||||| ||||| | |||||||||||| | ||| | ||||||| ||| Sbjct 2502361 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2502420 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||||||||| || || | ||||| | |||||||| | ||| Sbjct 2502421 TGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCAT 2502480 Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 ||||| |||| ||| ||||| ||||| || | | || | || || || || | || Sbjct 2502481 TGGAA-TAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAA 2502539 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245 | | ||| ||| | || || |||||||| | ||||||||| ||||| ||| | Sbjct 2502540 TGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTA 2502599 Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305 | || || |||| |||| || ||| |||||||| | | || |||||||| || Sbjct 2502600 A-AGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGAC 2502658 Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCT 26365 | ||| | | | || || | ||| || || || | | |||||||| | |||| | Sbjct 2502659 ATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTT 2502718 Query 26366 TCACTCA--AAGCTGTATAAGTTTCAAGAACT 26395 | | || || || ||||| |||| |||| Sbjct 2502719 TGAGACATCAAATTG--TAAGTCTCAATAACT 2502748 Score = 145 bits (160), Expect = 4e-30 Identities = 215/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||| | | |||||| ||||| |||||||||| ||||||| ||||| |||| | | Sbjct 920510 ACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAAAACAAATCCCTCGTACGAAAC 920451 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 ||||| || || ||||||||| | | | ||| | ||||| | ||| | ||||| || Sbjct 920450 TCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGGC 920391 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104 || || |||||||| ||| ||| |||||| ||||||||||| || || |||| ||| Sbjct 920390 TCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGCA 920331 Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA 26164 || | ||||| ||| ||||| ||||||| |||| || ||| || ||||| Sbjct 920330 GTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGCT 920271 Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224 || | || ||| | ||||||| |||| |||||| || || || |||| ||| Sbjct 920270 ATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATTCCAATACCGCCAGAAGCTTTA 920211 Query 26225 GAAAT 26229 ||||| Sbjct 920210 GAAAT 920206 Score = 100 bits (110), Expect = 1e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074 ||| || |||| ||| |||||||| | | ||||||||| |||| || |||||||| Sbjct 2501392 AAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTC 2501451 Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134 ||| || || || ||||| || ||||| || || |||||| || | || | || || Sbjct 2501452 ATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTT 2501511 Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 ||||| ||| | ||| ||| || || ||| |||| ||||||||| Sbjct 2501512 TCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATC 2501556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039885894775