Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq37 205 5e-48
>seq37
Length=3023111
Score = 205 bits (226), Expect = 5e-48
Identities = 357/512 (70%), Gaps = 8/512 (2%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||| |||| || ||||||| |||||||||||||| | | |||||| ||||||||
Sbjct 2502241 ATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGG 2502300
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
||||||| || || || ||||| ||||| |||||||| || || || |||||| |
Sbjct 2502301 GATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2502360
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| || | ||| ||||| ||||| | |||||||||||| | ||| | ||||||| |||
Sbjct 2502361 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2502420
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| ||| || ||||||||||| || || | ||||| | |||||||| | |||
Sbjct 2502421 TGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCAT 2502480
Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
||||| |||| ||| ||||| ||||| || | | || | || || || || | ||
Sbjct 2502481 TGGAA-TAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAA 2502539
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245
| | ||| ||| | || || |||||||| | ||||||||| ||||| ||| |
Sbjct 2502540 TGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTA 2502599
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| || || |||| |||| || ||| |||||||| | | || |||||||| ||
Sbjct 2502600 A-AGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGAC 2502658
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCT 26365
| ||| | | | || || | ||| || || || | | |||||||| | |||| |
Sbjct 2502659 ATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTT 2502718
Query 26366 TCACTCA--AAGCTGTATAAGTTTCAAGAACT 26395
| | || || || ||||| |||| ||||
Sbjct 2502719 TGAGACATCAAATTG--TAAGTCTCAATAACT 2502748
Score = 145 bits (160), Expect = 4e-30
Identities = 215/305 (70%), Gaps = 0/305 (0%)
Strand=Plus/Minus
Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984
||| | | |||||| ||||| |||||||||| ||||||| ||||| |||| | |
Sbjct 920510 ACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAAAACAAATCCCTCGTACGAAAC 920451
Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044
||||| || || ||||||||| | | | ||| | ||||| | ||| | ||||| ||
Sbjct 920450 TCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGGC 920391
Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104
|| || |||||||| ||| ||| |||||| ||||||||||| || || |||| |||
Sbjct 920390 TCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGCA 920331
Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA 26164
|| | ||||| ||| ||||| ||||||| |||| || ||| || |||||
Sbjct 920330 GTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGCT 920271
Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224
|| | || ||| | ||||||| |||| |||||| || || || |||| |||
Sbjct 920270 ATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATTCCAATACCGCCAGAAGCTTTA 920211
Query 26225 GAAAT 26229
|||||
Sbjct 920210 GAAAT 920206
Score = 100 bits (110), Expect = 1e-16
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
||| || |||| ||| |||||||| | | ||||||||| |||| || ||||||||
Sbjct 2501392 AAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTC 2501451
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
||| || || || ||||| || ||||| || || |||||| || | || | || ||
Sbjct 2501452 ATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTT 2501511
Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
||||| ||| | ||| ||| || || ||| |||| |||||||||
Sbjct 2501512 TCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATC 2501556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039885894775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |