Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq37 154 2e-32 >seq37 Length=3023111 Score = 154 bits (170), Expect = 2e-32 Identities = 210/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 139262 TCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGC 139321 ||| |||| |||||||| | |||||| | | || || || || | | ||||| || Sbjct 1508871 TCCTTCTGGTCCATGATAAACGGCATAGTTTGCTGAAATGTTAGCCAATAAAGCTTGAGC 1508930 Query 139322 TGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGC 139381 |||||| || || || ||||| |||||| | ||||| || ||||||||||| | || Sbjct 1508931 TGTGCAAATATTTGATGTAGCTTTCTCTCTTTTGATATGTTGTTCTCTAGTTTGCAAAGC 1508990 Query 139382 TAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTAT 139441 |||||| | || || || || || || ||| || |||||||| |||||||| Sbjct 1508991 TAATCTCAAAGCTGGTTTACCCAATCTATCTTTTGAGACCCCAACAATTCTTCCAGGTAT 1509050 Query 139442 CTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCAT 139501 ||||| |||||||| | || ||||||||||||||||| ||||| || ||||| | Sbjct 1509051 TTTTCTGGCATACTTGTGGGAAGTGGCAAAGAATGCAGCATGGGGACCACCATATCCAAA 1509110 Query 139502 AGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554 ||||| ||| || ||||| | |||||| || |||||| || |||||| Sbjct 1509111 AGGAACACCGAATCTTTGTGAAGTACCTAAGGCGATATCAGCGCCAAACTCAC 1509163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||||||||| || || || || ||||||| |||| ||||||||||| || || || Sbjct 1509483 CATTGCCTCAGCAGCAGCGGTACCTTCATCCAATAATGATGCGTTTGCCATGTCCAAACC 1509542 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| | ||| || | ||||| || || || ||| || ||||| || ||||| || Sbjct 1509543 TGTTAAGGATGTAATCATGGTTTGATAGTTTAACAAACTTTGCAATCGACCTTGAGAAAT 1509602 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCA-ACTAGGATTCTCAAGAACGTTTCGCT 140037 ||| | |||||| || || || || |||||||| || | | | ||| || ||||| | Sbjct 1509603 CTCTGGTTGATATGGGGTATACGAAGTGTACCACTCTGGCAGTTCCAACAA-GTTTCTTT 1509661 Query 140038 GTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082 | || ||||| ||| ||| || ||| || |||| || |||| Sbjct 1509662 GAATCACTGGTGGTAAAATCGTACCAGCATAACCTTTTCCAATAA 1509706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998132213240