Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq37 114 2e-20
seq16 102 1e-16
>seq37
Length=3023111
Score = 114 bits (126), Expect = 2e-20
Identities = 350/531 (66%), Gaps = 29/531 (5%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGA---AGACCCTGAAT 64770
|||||||| |||||| ||||||| ||||||||| | || |||| ||| |||||
Sbjct 2626798 TGGACTGCAGAAGAAATTGATTTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAAT 2626857
Query 64771 GAAAATGAAAAGAAATTCATA--AAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAA 64828
|| ||||||| | ||||| ||| | || |||| || || |||| || ||||| |
Sbjct 2626858 GACAATGAAAGGTTTTTCATTGGAAGAA--TCTTGGCCTTTTTCGCTGCCTCTGATGGTA 2626915
Query 64829 TTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCT 64888
||||| ||| || | | || ||| | | |||||| || || ||||| |
Sbjct 2626916 TTGTTAATGAAAACTTGGTGGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAAT 2626975
Query 64889 CATTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTG 64947
|||| || | | ||| | || ||| ||| ||||| ||||| |||||| ||||
Sbjct 2626976 CATTTTATGGTTTCCAAATC-ATGATGGAAAACATTCATTCAGAAACTTATTCATTATTG 2627034
Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAG-----TTATTTGAAGCCATCC 65002
||||| | || || |||||| | || ||||| | ||||| | || ||
Sbjct 2627035 ATTGAAACTTATATCAAGGATCCA-----AAGGAAGCCGATTTCTTATTCAATGCTATTG 2627089
Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT 65062
|||| | || ||| | |||||||| | ||||| || | |||| || | | | |
Sbjct 2627090 AAACCATCCCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCA---AGATT 2627146
Query 65063 CTCGCTCC----TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTC 65118
| || | | || || ||| | | |||| ||||| ||| ||||||||||| |||
Sbjct 2627147 C-CGATGCATTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCTTTTTC 2627205
Query 65119 TCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATG 65177
|| || || ||| | |||| |||||||||||| | || | |||||||| |
Sbjct 2627206 AGTGGATCGTT-TGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATTGAC 2627264
Query 65178 CTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
||| || |||||| | |||| || ||||| ||| | ||| || |||||
Sbjct 2627265 CTTTTCCAATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGC 2627315
Score = 100 bits (110), Expect = 3e-16
Identities = 219/323 (68%), Gaps = 9/323 (3%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
||||||||||||||||| || || |||| | || ||| || || || ||||| |
Sbjct 2807585 GGTGCCAAGATCCCCCGTGGTGCTATTCTTTCAGGGCCGCCGGGAACAGGTAAGACATTG 2807526
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394
|||||| ||||| || || ||| | || || || || | || | | | ||
Sbjct 2807525 CTCGCCAAAGCCACAGCTGGGGAAGCTGGCGTTCCGTTTTATTCTGTATCCGGTTCCGAA 2807466
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
|| || || ||||||||||||||||||||| | | || || ||| | || | | ||
Sbjct 2807465 -TTCGTTGAAATGTTTGTTGGTGTGGGTGCCTCACGTGTGCGTGATTTATTCAAGACTGC 2807407
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACG 175514
| |||||| ||||| |||||| || |||| || || ||||| | || |||||| |
Sbjct 2807406 AAGGGAAAATGCACCATCTATTGTGTTTGTTGACGAAATCGATGCCATTGGTAAGCAAAG 2807347
Query 175515 CAGCGCTGGTGGTATGC-----CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTA 175569
| | | | | |||| ||| |||||||| |||||| ||| | |||||||||
Sbjct 2807346 -ATC-CAAGGGAAATGCAACAGGAGCTAATGACGAAAGAGAAACTACATTGAATCAACTA 2807289
Query 175570 CTCACCGAGATGGATGGCTTTGA 175592
| || |||||||| |||||
Sbjct 2807288 TTGGTTGAAATGGATGGGTTTGA 2807266
>seq16
Length=320745
Score = 102 bits (112), Expect = 1e-16
Identities = 186/271 (69%), Gaps = 6/271 (2%)
Strand=Plus/Plus
Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGT-CTCTTCAAGAACACC-----AATT 27834
|| || |||||||||||||| |||||| ||| || ||| |||| || ||||
Sbjct 6310 CCTGTGGATCCAAATCCACCTTCACCTCGCTCAGTGCTCGTCAATGCTTCCTCAGTAATT 6369
Query 27835 TCCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTC 27894
|| | | ||| | | || | || | || | ||| || || | ||| || ||
Sbjct 6370 TCTTCAATATCAGCATTAACAATTCTTTCTAAAACCAATTGAGCAATTCTATCGCCCTTT 6429
Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954
|| || ||||||| || || || ||||| | || ||||| ||||||||| |||
Sbjct 6430 TTAACATCAAAGTTCTTTTCAGAATGGTTGAACAAGACAACTTTAACTTCACCTCGATAA 6489
Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014
|| | ||||| ||||| |||||| | ||||||||| || ||||| || || || ||
Sbjct 6490 TCAGCGTCAATGACACCTGCACCAGTTGAAATACCATGTTTGACAGCAAGCCCCGAACGA 6549
Query 28015 GGTGCAACACGACCATACACACCATTTGGCA 28045
||||| ||||||||||| |||| | ||||
Sbjct 6550 GGTGCCACACGACCATATGTACCAATAGGCA 6580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569324086560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |