Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq22 178 2e-39
seq3 174 3e-38
>seq22
Length=92557
Score = 178 bits (196), Expect = 2e-39
Identities = 182/238 (76%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||||| | ||||| ||| ||
Sbjct 76990 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTT 77049
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| || |||||| ||| || |||||||| || |||||||| ||||| |||||
Sbjct 77050 GTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTG 77109
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || |||||||| ||||| || |||| ||| | || |||||| || ||
Sbjct 77110 ATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGA 77169
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|||||||| |||| || || || ||||| || | ||||| || || |||||||||
Sbjct 77170 TGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 77227
Score = 165 bits (182), Expect = 1e-35
Identities = 177/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 193127 TTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATA 193186
||| | |||||||||||||| | |||| || ||||| | ||||| ||| || ||
Sbjct 76765 TTAAAAACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTA 76824
Query 193187 GTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATC 193246
|||||| || |||||| ||| || |||||||| || |||||||| ||||| ||||||||
Sbjct 76825 GTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATC 76884
Query 193247 AGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGA 193306
|| || || |||||||| ||||| || |||| ||| | ||| |||||| || || ||
Sbjct 76885 TGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGA 76944
Query 193307 CTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| |||| || || || ||||| || | ||||| || || ||||||||
Sbjct 76945 TTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
>seq3
Length=600384
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| ||||| |||| || || || || ||||||||
Sbjct 22040 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 21981
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 21980 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 21921
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || ||||| || |||| || | ||| ||| || || || ||||||||
Sbjct 21920 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 21861
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| ||| || |||||||| || || ||||| ||||| |||||||||
Sbjct 21860 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 21812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899653983909840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |