Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq37 275 1e-68
seq22 147 4e-30
seq3 147 4e-30
>seq37
Length=3023111
Score = 275 bits (304), Expect = 1e-68
Identities = 561/831 (68%), Gaps = 24/831 (3%)
Strand=Plus/Minus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650
|||||||||||||||||| || ||| ||| ||||| | || | | | || ||||
Sbjct 2627547 CATAAAATCAAATGGATTGGTGACATTGTAAACTTTTT-TGTTACCCAAAGCAACCAATA 2627489
Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710
|||| ||||| ||||||||||||||||| |||| || | ||||||||| ||||| ||
Sbjct 2627488 ATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAAC 2627429
Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770
||| ||| ||||||||| || ||||||||||| ||||| || |||| |||| ||
Sbjct 2627428 TAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATTC 2627369
Query 49771 taattatattattttttgataa--tttatatttaatatgattcgcatatattaaACATGC 49828
| || | || ||| | | | | ||| || | |||| ||| | | || |||||
Sbjct 2627368 T--TTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGA---GCAAACAACAAGCATGC 2627314
Query 49829 AAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 49888
||||||||| |||||||| || || | | | || |||||||| ||| || ||||||||
Sbjct 2627313 AAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGG 2627254
Query 49889 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAATAT 49945
||||||||||||||| || | ||| || || || |||| | | ||| |||| || ||
Sbjct 2627253 CATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACT-GAAA--AAGAT 2627197
Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCTAA 50002
|||||| ||| ||||| || | | ||| | ||||| ||| ||| ||||
Sbjct 2627196 ACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAAC---AATGCATCGGAATCTTG 2627140
Query 50003 TATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 50062
||||| | || |||||||| || || ||||| || ||| || |||| ||||| ||
Sbjct 2627139 AATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATT 2627080
Query 50063 AAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACAT 50122
||||| || ||| | || ||||| ||||| |
Sbjct 2627079 GAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGT 2627020
Query 50123 TTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATA 50182
||| ||||| | |||||| ||||| || ||||||| | | ||||| | |
Sbjct 2627019 TTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAAT 2626960
Query 50183 CTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGC 50242
|||||||| | | | || ||| || || || ||| |||||||||||||| || ||
Sbjct 2626959 TTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGC 2626900
Query 50243 GAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTC---CCA 50299
||| || || || | | ||| ||| ||||||| || || || || || |||
Sbjct 2626899 GAAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCA 2626840
Query 50300 AGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTT 50359
| | |||||| || |||||| | ||||||| ||||| ||||||||| | | ||
Sbjct 2626839 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2626780
Query 50360 TTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCG 50410
|| |||||||| | || ||| | | ||| ||||| | ||||| ||
Sbjct 2626779 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACG 2626729
>seq22
Length=92557
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192306 AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365
|| ||||||||| | | || || || ||||| || | ||||| || || || ||
Sbjct 76768 AAAACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTC 76827
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| || |||| |||| |||||||||||||||||||| || ||||| |||||||| ||
Sbjct 76828 GGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGG 76887
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || |||||||| ||||| || || ||| ||||| |||| ||||| |||||
Sbjct 76888 TGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTC 76947
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| || ||||| ||||| || |||||||| | || || |||||
Sbjct 76948 AACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || || || || | ||||| || || || ||
Sbjct 76997 ATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCG 77056
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| |||||||||||||||||||| || ||||| |||||||| |||
Sbjct 77057 GACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 77116
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| || || ||| || || |||| ||||| || ||
Sbjct 77117 GGAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCA 77176
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| |||| || ||||| ||||| || |||||||| | || || ||||||
Sbjct 77177 ACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 77227
>seq3
Length=600384
Score = 147 bits (162), Expect = 4e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || ||||||| || || ||| || || || ||
Sbjct 22040 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 21981
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 21980 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 21921
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || ||||| || || || ||||| || | || || || || ||
Sbjct 21920 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 21861
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| ||| ||||||||||| || | ||||| | ||| || ||||||
Sbjct 21860 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 21812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479533294950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |