Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq37 170 6e-37
seq2 89.7 2e-12
>seq37
Length=3023111
Score = 170 bits (188), Expect = 6e-37
Identities = 623/957 (65%), Gaps = 25/957 (3%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTC 155644
|||| || |||| ||||| || ||| || | | | || || | ||||| ||||| ||
Sbjct 2501955 CAATCGAAGCCAAGTTACAAACAGCAA-CTTCATCTGGT-GCCGAATATTCAACAATTTC 2502012
Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704
||| |||| ||| ||| || || || ||||| || ||||| || || |||||||
Sbjct 2502013 ACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACA 2502072
Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764
|||||||||||| | ||| ||||||| || ||||| | ||||| |||| ||
Sbjct 2502073 AGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATA 2502132
Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCCGACTCATATTTCATA 155822
||| | | | || || ||| || || || | ||||| ||| |||||| |
Sbjct 2502133 CCACAATTTTTGAGCTTTGATTG--TTTTTCTACCACGACCTTCTTTCTCGTATTTCTCA 2502190
Query 155823 TACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCA-GTCCAGGGCACTTATCGGGG 155879
|||| | || || || ||||| ||| |||| || || | || | || ||
Sbjct 2502191 TACAAC--TCAACAAATTCGTCACCATAAGTATCAGCCAAGTTTGGAGCT-TCATTTGGA 2502247
Query 155880 CAAAACAGCGACCAA--ATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCC 155937
| |||| | |||| | | || | | || | | |||||| | ||| ||
Sbjct 2502248 GAGAACAATGTCCAATCACCATTTTGCTCA--ACTCTTTTCATAAACAAATCTGGGATCC 2502305
Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997
| | ||| ||| | ||| || || | || || | || || ||||| | | |
Sbjct 2502306 ACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTT 2502365
Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057
| | ||| || ||||||| || ||| || ||||| | ||||||| ||| |
Sbjct 2502366 CAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTC 2502425
Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114
||||| ||||| ||||| ||||| |||||||| || ||||| |||| | ||| ||||
Sbjct 2502426 TCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAA 2502485
Query 156115 TAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTA 156173
|||||||||| ||||| || ||||| || ||| || | | ||||| || |||| ||
Sbjct 2502486 TAATACCATTTGAAGTACCGTTGGTACCAGCG-ATGTAGGCACCAGTGGAACGAATGTTG 2502544
Query 156174 TGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTA 156233
|| ||||| | |||||||||||| | | ||| ||||| || ||| ||||| |||
Sbjct 2502545 TGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTG 2502604
Query 156234 TTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGA 156293
| ||||||||||||||||||| |||| ||||| | | | || || | |||
Sbjct 2502605 TCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGT 2502664
Query 156294 GGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGAC 156353
||| ||| || || || ||||| | || | ||||| |||| || | | ||||
Sbjct 2502665 GGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGAC 2502724
Query 156354 ATATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAGAGAC 156412
|| ||| ||| ||||| ||| |||| | || || || |||| |||| ||
Sbjct 2502725 ATCAAATTGTAAGTCTCAATAACTCTT-GGGATATCTCTTCCATGGATACCAATAGCAAC 2502783
Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472
||||| || || || || | || ||| ||||| ||| || | | ||||
Sbjct 2502784 TCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATGA 2502843
Query 156473 GCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529
| |||| |||||| || || || |||| | |||||||||| ||| ||||
Sbjct 2502844 TCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAATCACGGTCATAAACAAT 2502900
Score = 127 bits (140), Expect = 6e-24
Identities = 257/378 (68%), Gaps = 5/378 (1%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
||||| || ||||||| | ||||||| |||||| || |||||||| ||||| |
Sbjct 2807179 CTATCGAATCTACCAGGTCTCAATAATGCTCTGTCTAAAATGTCGGCTCTATTTGTACCA 2807238
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
||||||||||| | || || | ||| |||||||| || | ||||||
Sbjct 2807239 GCCAATACAACGACGTGGTCAGTACTATCAAACCCATCCATTTCAACCAATAGTTGATTC 2807298
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029
| ||| ||| ||||| ||||| | ||| ||| || ||| | | |||| |||
Sbjct 2807299 AATGTAGTTTCTCTTTCGTCATTAGCTCCTGTTGCATTTCCC---TTGGATCTTTGCTTA 2807355
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| ||||| |||||||||| || | | | | || | ||||| || ||| |
Sbjct 2807356 CCAATGGCATCGATTTCGTCAACAAACACAATAGATGGTGCATTTTCCCTTGCAGTCTTG 2807415
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
||||| || | ||||| || || || | ||||||| ||||||| || ||||| ||| ||
Sbjct 2807416 AATAAATCACGCACACGTGAGGCACCCACACCAACAAACATTTCAACGAATTCGGAACCG 2807475
Query 289150 GATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
||||| |||| || | || ||||| || ||| || | || || | ||||||
Sbjct 2807476 GATAC-AGAATAAAACGGAACGCCAGCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTT 2807534
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||||||||| || || ||
Sbjct 2807535 ACCTGTTCCCGGCGGCCC 2807552
>seq2
Length=358706
Score = 89.7 bits (98), Expect = 2e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||| |||||||| ||||||||| || |||| ||||| | || | | | ||
Sbjct 130685 CTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGATTGCTGGGGCCATATCCCTT 130744
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| || ||||| || | |||||| ||||| |||| ||||||| |||| || ||||||
Sbjct 130745 GCCGTTTTGAATAAATCACGTACACGCGATGCACCAACACCAACAAACATCTCAACAAAT 130804
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|| || |||| || | || | |||| |||||| || || ||| | ||||
Sbjct 130805 TCCGATCCGGAAACACTGAGAAAAGGTACACCTGCTTCACCAGCAGTTGCTTTTGCCAAC 130864
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCC 289227
| ||||||||||| ||||| || |||
Sbjct 130865 AAGGTCTTACCTGTACCAGGAGGCCCC 130891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816902266469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |