Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq37 170 6e-37 seq2 89.7 2e-12 >seq37 Length=3023111 Score = 170 bits (188), Expect = 6e-37 Identities = 623/957 (65%), Gaps = 25/957 (3%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTC 155644 |||| || |||| ||||| || ||| || | | | || || | ||||| ||||| || Sbjct 2501955 CAATCGAAGCCAAGTTACAAACAGCAA-CTTCATCTGGT-GCCGAATATTCAACAATTTC 2502012 Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704 ||| |||| ||| ||| || || || ||||| || ||||| || || ||||||| Sbjct 2502013 ACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACA 2502072 Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764 |||||||||||| | ||| ||||||| || ||||| | ||||| |||| || Sbjct 2502073 AGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATA 2502132 Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCCGACTCATATTTCATA 155822 ||| | | | || || ||| || || || | ||||| ||| |||||| | Sbjct 2502133 CCACAATTTTTGAGCTTTGATTG--TTTTTCTACCACGACCTTCTTTCTCGTATTTCTCA 2502190 Query 155823 TACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCA-GTCCAGGGCACTTATCGGGG 155879 |||| | || || || ||||| ||| |||| || || | || | || || Sbjct 2502191 TACAAC--TCAACAAATTCGTCACCATAAGTATCAGCCAAGTTTGGAGCT-TCATTTGGA 2502247 Query 155880 CAAAACAGCGACCAA--ATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCC 155937 | |||| | |||| | | || | | || | | |||||| | ||| || Sbjct 2502248 GAGAACAATGTCCAATCACCATTTTGCTCA--ACTCTTTTCATAAACAAATCTGGGATCC 2502305 Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997 | | ||| ||| | ||| || || | || || | || || ||||| | | | Sbjct 2502306 ACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTT 2502365 Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057 | | ||| || ||||||| || ||| || ||||| | ||||||| ||| | Sbjct 2502366 CAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTC 2502425 Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114 ||||| ||||| ||||| ||||| |||||||| || ||||| |||| | ||| |||| Sbjct 2502426 TCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAA 2502485 Query 156115 TAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTA 156173 |||||||||| ||||| || ||||| || ||| || | | ||||| || |||| || Sbjct 2502486 TAATACCATTTGAAGTACCGTTGGTACCAGCG-ATGTAGGCACCAGTGGAACGAATGTTG 2502544 Query 156174 TGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTA 156233 || ||||| | |||||||||||| | | ||| ||||| || ||| ||||| ||| Sbjct 2502545 TGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTG 2502604 Query 156234 TTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGA 156293 | ||||||||||||||||||| |||| ||||| | | | || || | ||| Sbjct 2502605 TCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGT 2502664 Query 156294 GGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGAC 156353 ||| ||| || || || ||||| | || | ||||| |||| || | | |||| Sbjct 2502665 GGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGAC 2502724 Query 156354 ATATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAGAGAC 156412 || ||| ||| ||||| ||| |||| | || || || |||| |||| || Sbjct 2502725 ATCAAATTGTAAGTCTCAATAACTCTT-GGGATATCTCTTCCATGGATACCAATAGCAAC 2502783 Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472 ||||| || || || || | || ||| ||||| ||| || | | |||| Sbjct 2502784 TCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATGA 2502843 Query 156473 GCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 | |||| |||||| || || || |||| | |||||||||| ||| |||| Sbjct 2502844 TCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAATCACGGTCATAAACAAT 2502900 Score = 127 bits (140), Expect = 6e-24 Identities = 257/378 (68%), Gaps = 5/378 (1%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 ||||| || ||||||| | ||||||| |||||| || |||||||| ||||| | Sbjct 2807179 CTATCGAATCTACCAGGTCTCAATAATGCTCTGTCTAAAATGTCGGCTCTATTTGTACCA 2807238 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 ||||||||||| | || || | ||| |||||||| || | |||||| Sbjct 2807239 GCCAATACAACGACGTGGTCAGTACTATCAAACCCATCCATTTCAACCAATAGTTGATTC 2807298 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| ||| ||||| ||||| | ||| ||| || ||| | | |||| ||| Sbjct 2807299 AATGTAGTTTCTCTTTCGTCATTAGCTCCTGTTGCATTTCCC---TTGGATCTTTGCTTA 2807355 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| ||||| |||||||||| || | | | | || | ||||| || ||| | Sbjct 2807356 CCAATGGCATCGATTTCGTCAACAAACACAATAGATGGTGCATTTTCCCTTGCAGTCTTG 2807415 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 ||||| || | ||||| || || || | ||||||| ||||||| || ||||| ||| || Sbjct 2807416 AATAAATCACGCACACGTGAGGCACCCACACCAACAAACATTTCAACGAATTCGGAACCG 2807475 Query 289150 GATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 ||||| |||| || | || ||||| || ||| || | || || | |||||| Sbjct 2807476 GATAC-AGAATAAAACGGAACGCCAGCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTT 2807534 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||||||||| || || || Sbjct 2807535 ACCTGTTCCCGGCGGCCC 2807552 >seq2 Length=358706 Score = 89.7 bits (98), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||| |||||||| ||||||||| || |||| ||||| | || | | | || Sbjct 130685 CTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGATTGCTGGGGCCATATCCCTT 130744 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || || ||||| || | |||||| ||||| |||| ||||||| |||| || |||||| Sbjct 130745 GCCGTTTTGAATAAATCACGTACACGCGATGCACCAACACCAACAAACATCTCAACAAAT 130804 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 || || |||| || | || | |||| |||||| || || ||| | |||| Sbjct 130805 TCCGATCCGGAAACACTGAGAAAAGGTACACCTGCTTCACCAGCAGTTGCTTTTGCCAAC 130864 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCC 289227 | ||||||||||| ||||| || ||| Sbjct 130865 AAGGTCTTACCTGTACCAGGAGGCCCC 130891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816902266469