Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq16 89.7 6e-13
seq37 87.8 2e-12
>seq16
Length=320745
Score = 89.7 bits (98), Expect = 6e-13
Identities = 61/69 (88%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCT 50499
|||||||| ||||||||||||||||||||||||||||||||||||||| || | | ||||
Sbjct 265607 TATAATGCCGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAACAGAAGAAGCT 265666
Query 50500 ACTGCTGAA 50508
| || |||
Sbjct 265667 AGAGCCGAA 265675
>seq37
Length=3023111
Score = 87.8 bits (96), Expect = 2e-12
Identities = 172/248 (69%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 193356 GGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGT 193415
|| || | ||||||||| | || |||||||| ||| || |||||||| ||| |
Sbjct 926724 GGTCCCATTTATTACCAAAAATTGAAGCACATGGTGTTGGACAAGATGCATGCCAGA-GC 926782
Query 193416 CATGGGC--AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAG 193473
| |||| ||| | | || ||| |||| |||| | ||| | || || ||| |
Sbjct 926783 AAGGGGCCCAAGGGCCGTGTTGACAA-GACAGCCAACTGAAGGTAGATCCAGAGATGGTG 926841
Query 193474 GTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCA-ATTC 193532
|||||||||| ||||||||||| | ||| ||| || | | |||||||| | || |||
Sbjct 926842 GTTTAAGATTGGGAGAAATGGAGAGAGATTGTGTTATCGCTTATGGTGCTTCCCAGCTTC 926901
Query 193533 TTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGT 193592
|| | |||||| || | | | ||| ||| ||||| | || |||||||| | |||||
Sbjct 926902 TTCTA-GAAAGATTGATGATATCTTCAGATGCTTTTGAGGTTGATGTTTGTAACAAATGT 926960
Query 193593 GGTATGAT 193600
|| ||||
Sbjct 926961 GGGTTGAT 926968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628530909304320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |