Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 6e-13 seq37 87.8 2e-12 >seq16 Length=320745 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCT 50499 |||||||| ||||||||||||||||||||||||||||||||||||||| || | | |||| Sbjct 265607 TATAATGCCGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAACAGAAGAAGCT 265666 Query 50500 ACTGCTGAA 50508 | || ||| Sbjct 265667 AGAGCCGAA 265675 >seq37 Length=3023111 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/248 (69%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 193356 GGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGT 193415 || || | ||||||||| | || |||||||| ||| || |||||||| ||| | Sbjct 926724 GGTCCCATTTATTACCAAAAATTGAAGCACATGGTGTTGGACAAGATGCATGCCAGA-GC 926782 Query 193416 CATGGGC--AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAG 193473 | |||| ||| | | || ||| |||| |||| | ||| | || || ||| | Sbjct 926783 AAGGGGCCCAAGGGCCGTGTTGACAA-GACAGCCAACTGAAGGTAGATCCAGAGATGGTG 926841 Query 193474 GTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCA-ATTC 193532 |||||||||| ||||||||||| | ||| ||| || | | |||||||| | || ||| Sbjct 926842 GTTTAAGATTGGGAGAAATGGAGAGAGATTGTGTTATCGCTTATGGTGCTTCCCAGCTTC 926901 Query 193533 TTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGT 193592 || | |||||| || | | | ||| ||| ||||| | || |||||||| | ||||| Sbjct 926902 TTCTA-GAAAGATTGATGATATCTTCAGATGCTTTTGAGGTTGATGTTTGTAACAAATGT 926960 Query 193593 GGTATGAT 193600 || |||| Sbjct 926961 GGGTTGAT 926968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530909304320