Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq37 405 4e-107 seq5 246 2e-59 seq36 212 5e-49 seq35 150 1e-30 seq6 113 3e-19 seq15 96.9 3e-14 >seq37 Length=3023111 Score = 405 bits (448), Expect = 4e-107 Identities = 788/1151 (68%), Gaps = 26/1151 (2%) Strand=Plus/Plus Query 281743 AGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAG 281801 || ||||||| ||||| |||| |||||| |||||||||||| |||||||||||||||| Sbjct 1178680 AGATTGACCAGTCAAGA-TAGCACCTTGAACAGCAGCACCATAAGCAACAGCTTCATCAG 1178738 Query 281802 GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCT 281861 | || | | || | | || |||||||| || || | || | | || | || | Sbjct 1178739 GGTTGATTGATTTTTCCAATTGTTTACCATCAAAGAAGTCAGACAACAATTTTTGAACTT 1178798 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | ||||| | | ||| || ||||| | |||| ||||| || || || || | | | Sbjct 1178799 TTGGAATTCTGGTTGAACCACCAACAAGGACAACTTCATCAACTTGAGACTTGTTAACCT 1178858 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | | |||| ||||||| |||||| ||||| | | || | ||||| | | | | Sbjct 1178859 TGGCATCCTTCAAAACTTGTTCAACTGGTTCCAAAGTAGACTTGAACAAAGCAGCATTGA 1178918 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 282041 ||||||||| ||||||| || | | || | |||| || || |||||||| | Sbjct 1178919 TATCTTCGAATCTAGCTCTGGTGATATTGGCGGAGAAATCTTCACCATCAAACAAAGAGT 1178978 Query 282042 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 282101 ||| ||||| || |||||||| |||||| | || | || || | |||||| || | Sbjct 1178979 CAATTTCAACAGTTGTTTGAGTACCAGAAGACAATGATCTCTTTGCTCTTTCACAAGCAG 1179038 Query 282102 TCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGTTTT--ATATTTTCTCT 282158 | || | ||||| ||| ||| | || | | | |||| | || | ||||| ||| Sbjct 1179039 TTCTCAATCTTCTTAAAGCTCTAGCGTCACCGG---AAATGTCCTTACCAGATTTTTTCT 1179095 Query 282159 TGAAATC-TTCAACACACCATGTTACAAGACGAT--TATCAAAATCTTCACCTCCCAATT 282215 | || || ||| | |||| ||| | | | | || ||||||| ||| ||||| | Sbjct 1179096 TAAATTCATTCTTGAAG---TGTTCCAACAAGTTGGTGTCGAAATCTTGACCACCCAAGT 1179152 Query 282216 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAA 282275 ||||| || | || ||| | || ||||| ||| | || ||| | | || Sbjct 1179153 GAGTATCACCAGCAGTGGCTTTAACGGTGAAAACACCACCAGTAATGTTCAACAAGGAAA 1179212 Query 282276 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTT 282335 ||||| || |||||||||| ||| ||||| | |||| |||| || || || ||| Sbjct 1179213 CATCAAAAGTACCACCACCCAAATCGAAAATCAAAACATGTCTTTCCTTTTC--GGATTT 1179270 Query 282336 T-----ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 | | | |||||| |||| |||||||||||||||||||| |||||||||||||| Sbjct 1179271 ACCAGCACCCAAACCATAGGCAATGGCAGCAGCAGTTGGTTCATTGATAATTCTCAAAAC 1179330 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 || | ||||||||| || ||||| || || ||||||||||| | || ||||| || Sbjct 1179331 GTTCAAACCAGCAATGGCACCAGCATCCTTGGTAGCTTGTCTTTGAGCGTCATTAAAGTA 1179390 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 || || ||||| |||||||| | | || | ||| ||||| | ||| || ||| Sbjct 1179391 AGCTGGGACAGTGATAACGGCTTTTTCAACCTTTTTACCAATTTTAGCTTCAGCAATTTC 1179450 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATT 282570 ||||| || | |||| |||||| || |||| || ||| ||| | ||||| ||||| Sbjct 1179451 CTTCATCTTGGTCAAAACCATTGAAGAGATTTCTTGTGGGGAAAAAGTCTTGGTTTCATC 1179510 Query 282571 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATA 282630 ||| || |||| | ||||| | |||| |||||| || |||||||| | Sbjct 1179511 CAAGTATTCAACCTCAATTTGTGGTTGTCCATTGACATCAATAACCTTGAATGGCCATGA 1179570 Query 282631 TTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 || ||||| |||||| || |||| |||| ||||||||||||| || || ||||| Sbjct 1179571 CTTGATATCCTTTTGAACGGATTCATCATCAAAAGCTCTACCAATTAAACGCTTAGCATC 1179630 Query 282691 AAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750 ||||| ||| || |||| || | |||||||||| ||||| ||||| ||||||| || Sbjct 1179631 AAAAACAGTGTTTTTTGGGTTCAAAGCAGCTTGATTCTTGGCAGCATCACCAATCA-ATC 1179689 Query 282751 TTCTGTCTCT-GTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 || || || ||||| | ||| | || ||||| | |||||||| ||||| |||| Sbjct 1179690 TTTCTTCACTAGTAAAAGCGACAAAAGAAGGAGTGACTCTGTTACCTTGTTCATTGGCAA 1179749 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 ||||||||||| || | || | | ||||| |||| || |||||||| | Sbjct 1179750 TAATTTCAACT---GCAGAGTCGTATGTAGCGACACATGAGTAAGTAGTACCTAAATCGA 1179806 Query 282870 TACCAATAGCA 282880 ||||||||||| Sbjct 1179807 TACCAATAGCA 1179817 Score = 378 bits (418), Expect = 5e-99 Identities = 1044/1573 (66%), Gaps = 47/1573 (3%) Strand=Plus/Minus Query 281330 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 281389 |||||| || |||||| ||||| | |||| || ||||| || | || || || Sbjct 2936063 GCTTCTTCAACCATTCTATCAATATCTTCTTTTGATAATCTACCCTTTTCGTTGGTGATG 2936004 Query 281390 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 281449 |||||| ||| || || ||| |||||||| || || || | ||||||||| Sbjct 2936003 GTAATACTCTCAGACTTACCAGTTCCCTTATCAGCAGCTTCAACTTTCAAGATACCATTG 2935944 Query 281450 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 281509 ||||||||| ||||||||||||||||| || || ||||| | || ||||| || || Sbjct 2935943 GCATCCAAAGAGAATGTGACTTCAATTTGTGGAACACCTCTTGGTGCTGGTGGAATACCA 2935884 Query 281510 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 281569 ||| | ||| | |||| | || || ||||| | | | ||| |||||| ||| || Sbjct 2935883 GTCAATTCGAATTTACCCAATCTGTTGTTGTCTTTGGCCATTGTTCTTTCACCTTCGTAA 2935824 Query 281570 ATTTGGATAGTAACTACAGT---TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT 281626 | ||| || ||| ||||| ||| ||||| | | ||| | || | | || || Sbjct 2935823 ACTTGAAT--TAA-AACAGTTGGTTGGTTATCAGCAGCAGTGGAGAAAATTTGAGACTTC 2935767 Query 281627 TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCT 281686 || ||||| | || ||||| ||| | | ||||||||| |||||| | ||||| Sbjct 2935766 TTGGTTGGAATAGCGGTATTTCTTCTAATCAAAGTGGTCATAACACCACCTGAAGTTTCA 2935707 Query 281687 AAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTT 281746 | ||| | || | ||| ||||||| | | |||||||| | | || | | Sbjct 2935706 ATACCCAAAGTCAATGGATTGACATCCAACAAGACAATATCATCGA------CACCTTCT 2935653 Query 281747 TGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATT 281805 | |||| |||| | | ||||||||| |||||||||||| |||||||||||||| ||||| Sbjct 2935652 TCACCACTCAAG-ACACCTGCTTGAACAGCAGCACCATAAGCAACAGCTTCATCTGGATT 2935594 Query 281806 AACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAG 281864 || | || | ||||| |||| || || | || || || || | || || | Sbjct 2935593 AATACCTTTGGATGCCTTTTTGCCATCAAAGAATTGTTCCAATAA-TTCTTGAACTTTTG 2935535 Query 281865 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 281924 |||| | | || || ||||| || ||||| |||| | | || || | | || Sbjct 2935534 GAATTCTTGTGGAACCACCAACCAAGACAATATCATCAATATCGGACTTTTTAACATTAC 2935475 Query 281925 AATCCAATAAAACTTTTTCAAC-GGGTTCAAGACCAGCTCT-AAACAAGTC-TGAACAAA 281981 |||| ||||||| |||||| || |||||| | ||| || ||| | || || Sbjct 2935474 CATCCTTCAAAACTTGTTCAACTGGCTTCAAGGTC-TTTCTGAATGAAGCCATGTTTAA- 2935417 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAA-GAA 282040 |||||| ||||| ||||||| |||||| | | ||||||| || || |||||| || Sbjct 2935416 -TTCTTCAAATTTGGCTCTAGAAAGAGTTTCTGAAAAATCAATACCATC-AACAAAGGAG 2935359 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| ||||| ||||| | ||| || | || | || || |||| | || Sbjct 2935358 TCAATTTCAACTCTAGTTGACATTTGAGATGACAATGTTCTCTTGGCCTTTTCAGCTTCT 2935299 Query 282101 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGTTTTATATTTTCTCTT 282159 || ||| | || | || ||||| | ||||| || ||| | || | ||| | || Sbjct 2935298 CTCTTTAATTTTGAAATTGCCTTTGC-GTTTGATGAAACATCGATATTGTGTTTCTTTTT 2935240 Query 282160 GAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGT 282219 || | || | | || | |||| | |||||||| ||||| ||||| | ||| Sbjct 2935239 AAATTGTTTGGCCAAGTATCTAACAATCTTGTGGTCAAAATCCTCACCACCCAAGTGAGT 2935180 Query 282220 ATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATC 282279 | || | ||||| |||| ||||| ||| |||||| ||||| | | ||||| Sbjct 2935179 GTCACCAGCAGTAGCCAAGACTTCGAAAACACCACCTTCAATCGACAACAAGGAGACATC 2935120 Query 282280 ATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATC 282339 | || || ||||||| ||| ||| | || ||| |||| | || | | | || || Sbjct 2935119 AAAAGTACCTCCACCCAAGTCATAAACGA-TA-ATTTGCTTCTCT-TCGTTGGTCTTGTC 2935063 Query 282340 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 282399 | ||||| |||| ||| || || ||||||||||||| |||||||||||| || | ||| Sbjct 2935062 CAATCCATAGGCAATAGCGGCGGCTGTTGGTTCATTAACAATTCTCAAAACGTTTAAACC 2935003 Query 282400 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 282459 |||||| | || ||||| ||||| ||||||||||| | ||| ||||| || || ||||| Sbjct 2935002 AGCAATAGTACCAGCATCCTTAGTTGCTTGTCTTTGGGCATCATTAAAGTAGGCTGGAAC 2934943 Query 282460 AGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||| | ||| || | || |||| || |||| || | || || ||||| || Sbjct 2934942 AGTGACAACAGCGTGGGTAACTTTCTTACCAAGGTACTCCTCAGCGATTGACTTCATCTT 2934883 Query 282520 ACTTAAAATCATTGATGAAATTTGTTCTG--GAGAATATTGCTTGGATTCATTTTGATAT 282577 | |||||||| ||||||| ||||| | ||||| | ||| || | || Sbjct 2934882 CCCCAAAATCATACCCGAAATTTCTTCTGGTGTGAATACTTTTTG-------TTCGCCAT 2934830 Query 282578 GATACTTCAAAATAT------GGTTTATTACCAACATTAATAACTTTAAATGGCCAATAT 282631 || ||||| | || ||| | || || || || || ||||| || Sbjct 2934829 TGTA-TTCAACAGATACAACCGGTCTGTTGCCCTTGTTTTCAATCTTGTATGGCATATGC 2934771 Query 282632 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 282691 |||| || ||||||| | | |||||| | | | ||||| |||| ||| |||| Sbjct 2934770 TTCAATTCCTTTTGAACAGTGTCATCATTATACTTTAAGCCAATCAATCTTTTGATATCA 2934711 Query 282692 AAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 282751 || | || ||| | ||| |||||||||| ||||||||| || |||| || || | Sbjct 2934710 AACACTGTGTTGTTGACATTGGAAGCAGCTTGATTTTTGGCTGCGTCACCAACCA-ATCT 2934652 Query 282752 TCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810 | || | | |||| |||||| ||||||||| | | |||||||||||| || || | Sbjct 2934651 TTCATCACCATTGAATGCAACATACGATGGAGTTATTCTATTACCTTGATCGTTGGCTAG 2934592 Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 282870 ||||||||||| ||||| | | ||||| ||||| | || || || ||||| || Sbjct 2934591 TATTTCAACTTTTCCATTCTTCATAACACCAACACATGAGTACGTAGTACCCAAATCGAT 2934532 Query 282871 ACCAATAGCAATT 282883 |||||| || || Sbjct 2934531 TCCAATAACAGTT 2934519 Score = 167 bits (184), Expect = 2e-35 Identities = 579/878 (66%), Gaps = 59/878 (7%) Strand=Plus/Minus Query 161002 TTTCTCAAAGAAATTGGCTTTGACAAAAACGTCGAtttttttCATGTATTCGAATGGATT 161061 ||| ||||||||||||| || || | | ||| || | ||| | || |||||||| Sbjct 2627589 TTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCTCCATAAAATCAAATGGATT 2627530 Query 161062 ATCAACATTG-AATTTTTTGCGATAACCAAGATCTACAAGTAATCTGTCAGCAACATATT 161120 |||||| || |||| | || |||| | | || | ||||||||| |||||| ||| Sbjct 2627529 GGTGACATTGTAAACTTTTTTGTTACCCAA-AGCAACCAATAATCTGTCGGCAACAAATT 2627471 Query 161121 TAATATATTGAGACATTAGTTCAGAATTCA-TACCAAGAAGTTTACACGGAAGAGAATCA 161179 || ||||||| |||| | | | |||||| | |||| || | || || | | |||| Sbjct 2627470 CAACATATTGACACATCAACTTACAATTCATTCCCAACAAACTAAC-TGGCAATGCATCA 2627412 Query 161180 TTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAACAACAGATTCT 161239 ||| ||||||| ||||||||||| ||||| ||||||| | ||||| ||| Sbjct 2627411 GTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATTCTTTCAACAA-----TCT 2627357 Query 161240 TT--CAAACGATTAT-TCAACAATGAATACATAATACAAGCAAGTTCTACAT--GTTTGT 161294 || | | ||| | ||||| || | ||||||| | | | || || ||| Sbjct 2627356 TTGGGTCAGGTCTATGTTGTAAATGA--GCAAACAACAAGCA--TGCAAAATCAGTGTGT 2627301 Query 161295 ----TTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCATT 161350 |||||||||| ||| |||| ||| || | | | || ||||||| || | Sbjct 2627300 AAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGCATTA-ATCC--- 2627245 Query 161351 TCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCCACTAAAGAAAACGCCTTCTACA 161410 ||||| | || ||||||||||| |||||||| |||||||| || || | || || ||| Sbjct 2627244 TCTCT--TCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCCTCAACA 2627187 Query 161411 ATAGAGAATGCTACTAATTTGTGAGCATATGTCTTATCAGA---TTTAATCCATTTATTA 161467 || || || || ||| | | |||| | ||| || || ||||||| | | Sbjct 2627186 GCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCCATCTGATG 2627127 Query 161468 CACCAATCAGCTTTCTTTTTAATACTTGGCATAGTTTTAATAGAATT-AATGAGTTTATT 161526 ||||||||| ||||||||||| || || |||| ||||| ||| ||| || | Sbjct 2627126 GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAAG---AAA 2627070 Query 161527 TCTCAAAGCATC------ATCTTTAACAAATGTAGTCAA-CATTAGTGAATACATTTCTC 161579 || || || ||| || | | | || |||| || || |||||| ||||| Sbjct 2627069 TC----GGCTTCCTTTGGATCCTTGATATAAGT-TTCAATCAATAATGAATAAGTTTCTG 2627015 Query 161580 CATGAGCATTTTCCATTGCAT--ATTGGAAACCATAAGCACATTCAGCTTCTTTTATTTT 161637 |||| |||||||| ||| ||||||||||||| ||| ||||| |||| Sbjct 2627014 AATGAATGTTTTCCAT--CATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2626957 Query 161638 CACAACATCAATAAGATTTTCTTTAATATTAGCATTAACAATACCATCAGCTGCCGCAAA 161697 || || || || ||||| | || |||||||||||||||||| || || || Sbjct 2626956 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2626897 Query 161698 AAATGCCA--ATACGTGCATAATAAAATTTCTATCATCATCGCTCAAATGATTATTCCAA 161755 ||| |||| || | | | ||| ||| || |||| || |||| | | ||||| Sbjct 2626896 AAAGGCCAAGATTCTTCC--AATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAA 2626839 Query 161756 TCATTCACATCTTTTGCCAAATCCACTTCTTCAACTGTCC--AATAATTTTTCATCTGAT 161813 |||| | |||||| | ||||| | |||||| | |||| ||| || |||| | | Sbjct 2626838 TCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGC--CT 2626781 Query 161814 CCTTGTAATTATCCCATACTTTTTGGTATTTAATAGGA 161851 |||||| | | ||| | || |||||| |||||||| Sbjct 2626780 TCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGA 2626743 Score = 98.7 bits (108), Expect = 7e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 86113 CCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAA 86172 || ||||| || |||| || || |||||||||||||| || ||| | | ||| | ||| Sbjct 1179278 CCCAAACCATAGGCAATGGCAGCAGCAGTTGGTTCATTGATAATTCTCAAAACGTTCAAA 1179337 Query 86173 CCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGT 86232 || ||||| | ||| ||| || |||||||| || ||||||||||| || ||||| Sbjct 1179338 CCAGCAATGGCACCAGCATCCTTGGTAGCTTGTCTTTGAGCGTCATTAAAGTAAGCTGGG 1179397 Query 86233 ACAGTAATAACTGCTTT 86249 ||||| ||||| ||||| Sbjct 1179398 ACAGTGATAACGGCTTT 1179414 Score = 96.9 bits (106), Expect = 3e-14 Identities = 166/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 432278 AAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATAT 432337 ||| |||| ||||||||||| | | ||||| ||||| ||||| || | || ||| | Sbjct 18951 AAGGTTGAAGGGTAAAGAAGGGAGGTTGAGAGGTAATTTAATGGGGAAAAGAGTGGATTT 18892 Query 432338 GTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 || || |||||||| || || |||||||||| | | | || ||||||||||||| Sbjct 18891 TTCGGCCCGTACAGTCATCTCTGGTGATCCTAATTTGGACTTGGATCAAGTTGGTGTTCC 18832 Query 432398 --TCTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAT 432455 | ||| ||||| || | | || | | |||||| |||||| | | || ||| | Sbjct 18831 AATATCA--ATTGCCAAGACCTTAACCTATCCCGAAATAGTAACACCATACAACATTCAC 18774 Query 432456 TATTTGACTCAATTAGTGAAAAATGGTAAAAGAGTATATCCAGGTGCCAATTTTGTAAT 432514 | |||||| |||| |||| ||| || || | | |||| ||||| || | ||| || Sbjct 18773 AAATTGACTGAATTGGTGAGAAACGGACCAAATGAACATCCTGGTGCAAAGTATGTGAT 18715 Score = 96.9 bits (106), Expect = 3e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 || || || |||| ||| || || ||||||||||||| ||| | | ||| | |||||| Sbjct 2935061 AATCCATAGGCAATAGCGGCGGCTGTTGGTTCATTAACAATTCTCAAAACGTTTAAACCA 2935002 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 ||||| || ||| ||| |||||||||||| || || |||||||| || ||||| ||| Sbjct 2935001 GCAATAGTACCAGCATCCTTAGTTGCTTGTCTTTGGGCATCATTAAAGTAGGCTGGAACA 2934942 Query 86236 GTAATAACTGC 86246 || | ||| || Sbjct 2934941 GTGACAACAGC 2934931 >seq5 Length=383113 Score = 246 bits (272), Expect = 2e-59 Identities = 332/457 (73%), Gaps = 4/457 (1%) Strand=Plus/Plus Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT-TC 282483 ||||||||||| ||||||||||| || || |||||||||| ||| |||||| | || | Sbjct 74679 GCTTGTCTTTGAGAATCGTTAAAGTAAGCTGGAACAGTAACAACAGCATCTTTAACAGTA 74738 Query 282484 TTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTG 282543 |||| | || | || || ||||||||| |||| ||| ||||| |||| Sbjct 74739 CCACCCAAGA-AACCTTCAGCAACTTCCTTCATTTTAACCAAAACCATGGATGAGATTTC 74797 Query 282544 TTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC 282603 |||||| | | | ||||| |||| || ||| |||| || | ||||||| ||| Sbjct 74798 TTCTGGGGTAAAAACCTTGGTTTCACCTTTGTATTCAACTTGAATGTTTGGTTTACCACC 74857 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 | ||||||||| ||||| ||| || ||||| |||||| | | |||| ||| Sbjct 74858 CTTGTCAATAACTTTGAATGGAAAATGCTTGATATCATTTTGAACTTCTGGATCATCAAA 74917 Query 282664 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTG 282723 | |||||||||||| ||||| ||||| |||| ||| |||| || || | |||||||| Sbjct 74918 TTTTCTACCAATTAAACGTTTAGCATCGAAAACAGTGTTGGCAGGGTTGATAGCAGCTTG 74977 Query 282724 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGT 282783 || ||||||||||| ||||| | ||| || || || |||| |||| | ||||| || Sbjct 74978 ATTCTTGGCTGCATCACCAATTAACCTTTCAGTATCAGTGAATGCAACAAAAGATGGTGT 75037 Query 282784 TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA-CACCTA 282842 || | |||||||| ||||| ||||||||||||||| || || ||||| | | | | | Sbjct 75038 AGTTCTGTTACCTTGGTCATTAGCAATAATTTCAACTCTATCA-TTTGCGAAATGAGCCA 75096 Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 ||||| | || ||||||||||||||||||| ||| Sbjct 75097 CACAAGAGTATGTGGTTCCTAAATCAATACCAACAGC 75133 >seq36 Length=441068 Score = 212 bits (234), Expect = 5e-49 Identities = 399/574 (70%), Gaps = 11/574 (2%) Strand=Plus/Minus Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714 |||| |||||||| ||||||||||| ||||| | ||| | || | |||| ||||| | Sbjct 10648 TAAT-TTGGTCATGATACCACCAGCAGTTTCAATACCTAATGACAATGGAGCAACATCCA 10590 Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCA-GTTTGACCAA-CAAGAATAGCTGCTTGAAT 281772 | | |||| ||| || || || | || | ||| ||||| | || ||||| | Sbjct 10589 ACAACAAGATATCTTGG-GTCTTGGATGAAGTGTCACCGGTCAAGA-TGGCAGCTTGGAC 10532 Query 281773 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 281832 ||||||||| || |||||||||||||| || || | || | || | || ||||||||| Sbjct 10531 AGCAGCACCGTAAGCAACAGCTTCATCTGGGTTGATAGACTTGTTCAATTCTTTACCATT 10472 Query 281833 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 ||| |||| |||| | || | | ||| ||||| | | ||| || ||||| | || Sbjct 10471 GAAGAAATCGGAAACCAATTTTTGAATCTTTGGAATTCTGGTTGAACCACCAACAAGGAC 10412 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 281952 |||||| | || ||||| || || | || | |||| |||||||||||||| || || Sbjct 10411 AATTTCTTCAACTTGTGACTTGTCAATCTTGGCATCCTTCAAAACTTTTTCAACTGGGTC 10352 Query 281953 AAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 282012 | | | ||| || ||||| | ||| | |||||| ||| |||||||||| || ||| Sbjct 10351 CAAAGTGGATCTGAATAAGTCAGCACACAATTCTTCAAATCTAGCTCTAGT--GATTGAA 10294 Query 282013 AT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070 | || || || || ||||| |||| ||||||| |||||| | ||||||| || || Sbjct 10293 GTGTAAAAGTCGATACCTTCATACAATGAATCAATTTCAATTGAGGTTTGAGCAGATGAT 10234 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT-TTTGCTGA 282129 || | | | || || | ||||||||| || |||| ||||| || ||| |||| | | Sbjct 10233 GACAAGGTTCTCTTTGCTCTTTCACATGCAGTTCTTAATCTTCTCAATGCTCTTTGGTTA 10174 Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 282189 | | ||| | || | ||||||||||| |||| | | | | || | | Sbjct 10173 -CCAGAAATATCCTTCTTGTTCTTTCTCTTGAATTCTTGGATGAAAAAGTTAACCAATCT 10115 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTT 282223 ||||| ||||||||||| ||||| | ||||||| Sbjct 10114 GTTATCGAAATCTTCACCACCCAAGTGAGTATTT 10081 Score = 199 bits (220), Expect = 3e-45 Identities = 322/459 (70%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT 282484 ||||||||||| ||||||||||| || || |||||||||| ||| |||||| | || Sbjct 9875 GCTTGTCTTTGAGAATCGTTAAAGTAAGCTGGAACAGTAACAACAGCATCTTTAACAGTA 9816 Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544 || | ||| | || |||| ||||| |||| || | ||| ||||| |||| | Sbjct 9815 CCACCCAAGTAACCTTCAGCAGTTTCCTTCATCTTACCCAATACCATGGATGAGATTTCT 9756 Query 282545 TCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 282604 ||||| | | ||||| |||| || ||| |||| || | ||| ||| ||| Sbjct 9755 TCTGGGGTGAAAACCTTGGTTTCACCTTTGTATTCAACTTGAATGTTTGGCTTACCACCC 9696 Query 282605 ACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAA 282662 | || |||||| ||||| | | ||| | ||| ||| || || | |||| || Sbjct 9695 TTGTCAACAACTTTGAATGGAAAGTGTTTAAGATCGTTTTGGAC--TTCAGCATCATCAA 9638 Query 282663 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722 | | |||||||||||| ||||| ||||| |||| ||| |||| || || | ||||||| Sbjct 9637 ATTTTCTACCAATTAAACGTTTAGCATCGAAAACAGTGTTGGCAGGGTTGATAGCAGCTT 9578 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782 ||| ||||| ||||| ||||| | ||| || || || |||| |||| | ||||| | Sbjct 9577 GATTCTTGGCAGCATCACCAATTAATCTTTCAGTATCAGTGAATGCAACAAAAGATGGTG 9518 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA--CACC 282840 | || | |||||||| ||||| ||||||||||||||| | | ||| |||| | | Sbjct 9517 TAGTTCTGTTACCTTGGTCATTAGCAATAATTTCAACTCTGTCGTTT--GCATAGTGAGC 9460 Query 282841 TACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 |||||| | || |||||||||||||| || | ||| Sbjct 9459 AACACAAGAGTATGTGGTTCCTAAATCAATTCCGACAGC 9421 >seq35 Length=916310 Score = 150 bits (166), Expect = 1e-30 Identities = 258/369 (70%), Gaps = 14/369 (4%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || ||||||||||| ||||| | ||| | || || | | | |||| ||||| ||| Sbjct 541813 TCGAAATCTTCACCACCCAAGTGAGTGTCACCATTAGTTGATTTGACTTCGAAAACACCA 541754 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | ||| ||| | | || |||| || |||||||||| ||| |||| | ||| Sbjct 541753 GCACCAATGTCCAAGATGGAAATATCAAAAGTACCACCACCCAAATCGAAAACAGCAACA 541694 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| | | || || || | |||||| || |||||||| ||||||||||| Sbjct 541693 A------CTTCACCATCCTTCTTTTCCAAACCATATGCCAAAGCAGCGGCAGTTGGTTCG 541640 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 |||| || ||||||||| || | ||| ||||| | || |||||||| || ||||||||| Sbjct 541639 TTAACAACTCTCAAAACGTTCAATCCAACAATTTTACCGGCATCTTTGGTAGCTTGTCTT 541580 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAAT 282492 || | ||||||||| || || ||| || | ||||||| ||||| | | ||| || | Sbjct 541579 TGAGCATCGTTAAAGTAAGCTGGACAGGTGACAACGGCA-CTGTTGATCTTTTTACCCA- 541522 Query 282493 ATAAGC-GCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 |||| |||| || |||| ||||||||| | ||||| | |||||||| ||| Sbjct 541521 --AAGCAGCTTCAGCGGTTTCTTTCATTTTGTTCAAAATGAAACCACCAATTTGTTGTGG 541464 Query 282550 AGAATATTG 282558 |||||||| Sbjct 541463 TGAATATTG 541455 Score = 102 bits (112), Expect = 6e-16 Identities = 270/408 (66%), Gaps = 16/408 (4%) Strand=Plus/Minus Query 281405 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 281464 ||||| | | ||||||| |||| || |||| ||||||| | ||| | || || Sbjct 542599 TTGTTGGAAGCTTTATCACGAGCAGAAACCTTAATGATACCATCAGTATCAATGTCGAAA 542540 Query 281465 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 281524 |||||||||||||| || || ||| | | || ||||| || ||| ||| |||| ||| Sbjct 542539 GTGACTTCAATTTGTGGAACACCTTTTGGTGCTGGTGGAATACCTGACAAGGTAAA-GTT 542481 Query 281525 CCCAGATTA--TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAA 281582 ||| || | || || ||| | || |||| || |||||| | ||||| | ||| || Sbjct 542480 ACCA-ATCAACTTGTTGTCTCTGGTCAATTCTCTTTCACCTTGGAAAACTCTGATTTCAA 542422 Query 281583 CTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTG 281642 | ||||| | | || ||||| || | | ||||| || ||||| || | Sbjct 542421 CCGAGGTTTGTCCAGCAGATGCAGTTGAGAAAATTTGTGATTTCTTGGCTGGAATAGTGG 542362 Query 281643 TGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAG 281702 |||||||| |||| | | | | || |||||| ||||| | ||| | || | | Sbjct 542361 TGTTTCTAGCAATCAATCTAGCGAAAACACCACCCATGGTTTCAATACCCAAGGACAATG 542302 Query 281703 GAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAG 281762 |||| ||||| | |||| | || | ||| | || |||| |||| ||| Sbjct 542301 GAGTAACATCCA-----ACAAAA---CGACATCTTT----AACTTCACCAGCAAGGATAC 542254 Query 281763 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG 281810 | ||||||| || ||||| | || ||||||||||| || ||||||| Sbjct 542253 CACCTTGAATGGCGGCACCCAAAGCGACAGCTTCATCTGGGTTAACAG 542206 >seq6 Length=582873 Score = 113 bits (124), Expect = 3e-19 Identities = 206/294 (70%), Gaps = 12/294 (4%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 |||| | ||| ||| | ||||||||||||||| | || ||||| ||||||| ||| Sbjct 130199 ACAAAATGAT-ATCGACATCTTCACCTCCCAAGTGGGTGTTTCCATTTGTAGCTCGAACT 130141 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | |||| ||||| || | ||| | | | |||| |||||||||||| | |||| Sbjct 130140 TCAAAAACACCATCCTCGATGTCCAAGATTGAGATATCAAAGGTTCCACCACCAAAATCA 130081 Query 282302 AAAATAAGTAC-ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGC 282360 || | | || |||| || ||| |||| ||||||| || || |||| ||||| Sbjct 130080 AATACAGCAACGATTCCTTCCTT--CCTTG--ATTTATCACATCCGTATGCAAGTGCAGC 130025 Query 282361 AGCAGTTGGTTCATTAATAATTCTCAAAACATT---AAGACCAGCAATTCTTCCTGCATC 282417 || ||||| |||||||| | ||| || || | || ||| | || | || | || Sbjct 130024 TGCTGTTGGCTCATTAATGA--CTCGAAGCACTTCCAACCCCA-CTGTTTTGCCAGAATT 129968 Query 282418 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 |||||| ||||||||||| ||||||||| || || || ||||||| ||| || Sbjct 129967 TTTAGTAGCTTGTCTTTGACTATCGTTAAAGTACGCCGGGACAGTAACAACTGC 129914 >seq15 Length=61706 Score = 96.9 bits (106), Expect = 3e-14 Identities = 96/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCA-TTA 131241 ||||| || || ||||||||||||||| ||||||||||||| || |||||||||| ||| Sbjct 55657 GCCACCATTGCCTTTGGTATGGGTATTGATAAACCGGATGTGAGGTTTGTTATTCATTTA 55716 Query 131242 CGGAGCTCCCAAGAA-TATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 131300 | | ||||||| | | ||||||||||| ||||| | || ||||| ||| | |||| Sbjct 55717 TTTA--TTCCAAGAAGTTTAGAAGGTTATTACCAAGAGACAGGAAGAGCTGGTAGAGATG 55774 Query 131301 G 131301 | Sbjct 55775 G 55775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740628583456362