Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq3 178 3e-39
seq22 154 3e-32
seq21 87.8 4e-12
>seq3
Length=600384
Score = 178 bits (196), Expect = 3e-39
Identities = 184/240 (77%), Gaps = 1/240 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| ||||||||| || || || || || || ||
Sbjct 22040 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 21981
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | |||||| ||||||||||| | ||||||||||||||| ||
Sbjct 21980 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 21921
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
||||||||||| ||||| ||||| | || ||||| ||||| || ||| | || ||
Sbjct 21920 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 21861
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTTT 82822
||| ||||| || || || || || | || || ||||| || |||||| || || ||||
Sbjct 21860 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATTCTT-TACTTTT 21802
>seq22
Length=92557
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||| | || |||||||| || || || || || ||
Sbjct 76771 ACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 76830
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | |||||| |||||||| || | ||||||||||||||| ||
Sbjct 76831 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 76890
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || ||||| ||||| | ||| ||||| ||||| || || | ||| ||
Sbjct 76891 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 76950
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || ||||| || ||||| || || || || || |||||
Sbjct 76951 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||||| || |||||||| || || || || || |
Sbjct 76998 TACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGG 77057
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | ||||||| ||||| | |||||| |||||||| || | ||||||||||||||| |
Sbjct 77058 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 77117
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| || ||||| ||||| | ||| || || ||||| || || | || |
Sbjct 77118 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAA 77177
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| || || || || ||||| || ||||| || || || || || ||||||
Sbjct 77178 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 77227
>seq21
Length=1407667
Score = 87.8 bits (96), Expect = 4e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 143955 GATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAACTTAGGAGA 144014
||||||||||| |||||||||| | | |||||||| |||||||| ||||| | ||
Sbjct 996551 GATGAGTGGACGACTTGGAAAACGAGGCTGGATCCAGTTTTGCATATCGAACTACGTCGA 996610
Query 144015 TGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAATAGCCAAT 144074
||||| ||| | || || || || || || ||||| |||||| | || || | |
Sbjct 996611 TGGGCGGATATATTGGTTGTATGTCCTTTGACTGCAAACACGTTATCCAAGATTTCACTT 996670
Query 144075 GGTATATGCGATAATTTA 144092
|| || ||||||||||||
Sbjct 996671 GGCATCTGCGATAATTTA 996688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826734552543
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |