Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq37 197 3e-45
seq16 93.3 1e-13
seq6 93.3 1e-13
>seq37
Length=3023111
Score = 197 bits (218), Expect = 3e-45
Identities = 564/861 (66%), Gaps = 7/861 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| ||||| ||||||||| | || | | ||||| | ||| | ||||| | | |
Sbjct 2502870 TACTTTGGATTCAAAACTTTGGAGAGATCATATTTGTTACGTATTAATGGAAAAGTTGCT 2502811
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||| | || |||||| || || | | ||||| |||||||| |||||| ||||| |
Sbjct 2502810 GAAAGACCACAACACTTGATTATGAGAGTTGCTATTGGTATCCATGGAAGAGATATCCCA 2502751
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||||||| ||| || | | | ||| | || ||||| | ||||
Sbjct 2502750 AGAGTTATTGAGACTTACAATTTGATGTCTCAAAGATACTTTACTCATGGTTCTCCATGT 2502691
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| || || || || ||| | |||| || | ||||| |||||| | | ||| ||
Sbjct 2502690 TTGTTCAATGCCGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAATGAA 2502632
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAA 110601
|| ||||||||||||||||||||||| || ||||||| | ||| | ||||| ||||
Sbjct 2502631 AGAAGATTCTATTGAAGGTATTTATGACACT-TTAAAGACATGTGCCTTGATTTCAAAAA 2502573
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
|||| || ||||| | || | || | ||||| || | || || | |||||
Sbjct 2502572 GTGCTGGTGGTATTGGATTGCATATCCACAACATTCGTTCCACTGGTGCCTACATCGCTG 2502513
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || ||| |||||| ||| || |||||||| | | || |||||| |||||||
Sbjct 2502512 GTACCAACGGTACTTCAAATGGTATTATTCCAATGGTTCGTGTTTTCAACAACACTGCTC 2502453
Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| ||||||||||| |||||| || | |||||| | ||||| ||||| |
Sbjct 2502452 GTTATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATATCTTGAACCAT 2502393
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
|||| | ||||| ||||| ||| | ||| || | || || || || |||||| |
Sbjct 2502392 GGCACGCTGATATCTTTGACTTCATTGAAATTAGAAAGAACCATGGTAAGGAAGAAATTA 2502333
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
|||| | || || || || ||||||| ||||||| || |||||| | ||| |
Sbjct 2502332 GAGCTAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTTATGAAAAGAGTTGAGC 2502273
Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958
||||||| ||| | | | | ||| || |||| | ||||| ||||
Sbjct 2502272 AAAATGGTGATTGGACATTGTTCTCTCCAAATGAAGCTCCAAACTTGGCTGATACTTATG 2502213
Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAA 111018
| | || |||| || | || || ||||| || |||||||| | | ||| ||
Sbjct 2502212 GTGACGAATTTGTTGAGTTGTATGAGAAATACGAGAAAGAAGGTCGTGGTAGAAAAACAA 2502153
Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078
| ||||||| || | |||| ||| | || ||||| ||| ||||| || || |
Sbjct 2502152 TCAAAGCTCAAAAATTGTGGTATTCCATCTTGGAGGCACAAACTGAGACTGGTACCCCAT 2502093
Query 111079 ATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTA 111138
|| ||||| || ||| | ||| ||| || || |||| ||||| || ||||
Sbjct 2502092 TCATGTTGTACAAGGATGCTTGTAACACCAAGTCCAACCAAAAAAATTTGGGTGTTATTA 2502033
Query 111139 AGTCTAGTAATTTGTGCTGTG 111159
| ||| || ||||| ||||
Sbjct 2502032 AATCTTCCAACTTGTGTTGTG 2502012
Score = 152 bits (168), Expect = 1e-31
Identities = 495/753 (66%), Gaps = 23/753 (3%)
Strand=Plus/Plus
Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494
||||| |||| | | || || ||| | ||||| ||||| ||| || | ||||||
Sbjct 2626741 TTTCCTATTAGATACCATGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGG 2626800
Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGG---GAAAAATTAACCTTG 131551
|||| ||||| || ||| | |||||| || |||||||| || ||||| |
Sbjct 2626801 ACTGCAGAAGAAATTGATTTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGAC 2626860
Query 131552 AATGAAAAAGATTTTGTTTCCAAAGTTCTTG-CATTCTTCGCCGGAAGTGATGGCATTGT 131610
||||||| | |||| || || ||||| | || ||||| | |||||| |||||
Sbjct 2626861 AATGAAAG-GTTTTTCATTGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGT 2626919
Query 131611 TATTGAAAATCTTGTTATTAA--TTTCATTCAAGAAATTGATATTCCTGAAGTAACATCG 131668
|| |||||| |||| | || ||| | | ||| || | |||||||||| | |||
Sbjct 2626920 TAATGAAAA-CTTGGTGGAAAACTTTTCTGCT-GAAGTTCAAATTCCTGAAGCCAAATCA 2626977
Query 131669 TTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGATT 131728
|| || || ||| | | ||| |||||| || | |||||||||||||||
Sbjct 2626978 TTTTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATT 2627037
Query 131729 GAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAATTT 131788
|| | | | | || || | | || || ||||| ||||| | | | |
Sbjct 2627038 GAAACTTATATCAAGGATCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATC 2627097
Query 131789 CCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT-AA 131847
||| |||||||||||| || || ||||| || | |||||||||| ||||||| | |
Sbjct 2627098 CCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCAA---GATTCCGATGCA 2627154
Query 131848 T--TTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905
| ||| || ||| | || ||||||||| |||||| ||||| | |||||| |||
Sbjct 2627155 TTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCT--TTTTCA-GTGGA 2627211
Query 131906 TTCTGTGCT---ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCC 131962
| | |||| || || ||| | |||||| | ||||| ||||| ||| | | || |||
Sbjct 2627212 TCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCC 2627271
Query 131963 AATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGA 132022
||| |||| || | | ||||||| || || ||||| ||||| || | | | |
Sbjct 2627272 AATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGC-ATGCTTGTTGTTTGC 2627330
Query 132023 AAATTTGC-TGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGA 132081
|||| | ||| || ||| ||| | | || || | |||| | |||||||||||
Sbjct 2627331 TCATTTACAACATAGACCTGACCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGA 2627390
Query 132082 TATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGCTGA 132141
|| || || || || |||| || || ||||| | |||| | || |||||| | |
Sbjct 2627391 AATTGAAAAAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAA 2627450
Query 132142 CTCTATGAAGGAGTACATTGAATTCGTTGCTGA 132174
| ||| | || ||||||| ||||| ||
Sbjct 2627451 GTTGATGTGTCAATATGTTGAATTTGTTGCCGA 2627483
Score = 120 bits (132), Expect = 7e-22
Identities = 141/184 (77%), Gaps = 10/184 (5%)
Strand=Plus/Minus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||||| ||| ||||| || ||||||| | ||||||||| ||||||||||||||
Sbjct 18629 CATTTGATGGACGATGATCCAGTCTTGTTCAACCGTCAACCATCATTGCATAAAATGTCT 18570
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAA--TGTAAG 305424
|||||||| || | ||| || | |||| | ||| ||||| ||||||| ||| ||
Sbjct 18569 ATGATGGCGCACAGAGTGAAGG--TTATGCCATATTCTACATTCAGATTAAACTTGTCAG 18512
Query 305425 T-GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483
| ||| | || |||||||| ||||| ||||| || |||||||| ||||||||||||
Sbjct 18511 TAACTT---CACCGTATAATGCCGATTTCGATGGTGACGAAATGAACTTGCATGTACCTC 18455
Query 305484 AATC 305487
||||
Sbjct 18454 AATC 18451
>seq16
Length=320745
Score = 93.3 bits (102), Expect = 1e-13
Identities = 117/156 (75%), Gaps = 6/156 (4%)
Strand=Plus/Plus
Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395
|||||| | || || ||| |||||| | | || || |||| ||| | | |||||| |
Sbjct 265505 TTCAATCGTCAGCCTTCATTGCATAGATTATCCATTTTGGCGCATTATGCCAAAGT-TCG 265563
Query 305396 TC--TGGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTT 305452
|| |||| || |||| |||| |||| ||| || || ||||||||||| ||||||
Sbjct 265564 TCCTTGGA--GAACTTTCAGATTGAATGAGTGTGTATGCACACCTTATAATGCCGATTTT 265621
Query 305453 GATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488
||||| |||||||||||| | ||||| |||||| ||
Sbjct 265622 GATGGGGATGAAATGAATTTACATGTTCCTCAAACA 265657
>seq6
Length=582873
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 167248 CACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTAC 167307
||||||||||||| || ||| |||||| || |||||||||| ||||| |||| ||
Sbjct 1147 CACCAGCATTATCAAACTCACCACAATAATTGGGAGCTGAAAATAATGTAACCAATTGAC 1088
Query 167308 GATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353
| || || |||||||| |||||||||||||||| ||| |||||
Sbjct 1087 GTTTACTGAAAAATTCATATCCATCTTCAACAACTTGATGAGCACG 1042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812237376557
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |