Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 123 6e-23 seq22 89.7 1e-12 >seq3 Length=600384 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| || || || ||||| |||||||| ||||| || |||||| Sbjct 21816 CAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCTGAC 21875 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || |||||||| || || ||| Sbjct 21876 ACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 21935 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || || || ||||||||||| || |||||| |||| |||||| || Sbjct 21936 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 21995 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||||| | ||| | || |||||| Sbjct 21996 CAAAAGGAATCTACTTTGCACTTGGTGTTGAGA 22028 >seq22 Length=92557 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| || || || ||| || ||||| | || Sbjct 76984 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 76925 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||| ||||| |||||||| ||| || || |||||| | || || Sbjct 76924 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 76865 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| |||| |||||| | || ||||| || Sbjct 76864 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 76805 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || | ||| | || |||||| Sbjct 76804 CACATTACACTTGGTGTTGAGA 76783 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| || || |||||| | || || || || || Sbjct 77142 AAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 77083 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| | || ||||| || || | ||| Sbjct 77082 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATCCACATTGCAC 77023 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 77022 TTGGTGTTGAGA 77011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820239743077