Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
seq22 104 2e-17
>seq3
Length=600384
Score = 114 bits (126), Expect = 1e-20
Identities = 173/244 (71%), Gaps = 4/244 (2%)
Strand=Plus/Minus
Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
||||||| || ||||||| | || ||||||||||| || || ||| |||||||| |
Sbjct 22052 TCTCTTT-TTACCACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGA 21994
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| |||| ||| |||| | || |||| || ||||| ||||| ||||| | |
Sbjct 21993 TGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTT 21934
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
| || || | || | | |||||||| |||||| ||| | | | | | ||||
Sbjct 21933 GTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGT 21874
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
| || || || || | ||||| ||||||||||| | ||||| ||||| || ||||
Sbjct 21873 CAGATGACTCAACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCA 21814
Query 35736 TTCT 35739
||||
Sbjct 21813 TTCT 21810
>seq22
Length=92557
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| ||||| || || |||||||||||||| |||| |
Sbjct 76772 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 76831
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || |||| || ||||| ||||| ||||| | || || || | |||
Sbjct 76832 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 76891
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | || ||||| |||||| || | | | | | ||||| ||||| |||
Sbjct 76892 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 76951
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || ||||| ||||| ||||| || || || |||||
Sbjct 76952 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || || || || |||||||||||||| |||| |
Sbjct 77000 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 77059
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || |||| || ||||| ||||| ||||| | || || || | |||
Sbjct 77060 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 77119
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | || ||||| |||| || | || |||| | | ||||| || || ||
Sbjct 77120 ATACCTTCTTTGTCTTGGATC-TTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAAC 77178
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
||| | ||||| || ||||| ||||| ||||| || || || |||||| ||
Sbjct 77179 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTG 77230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793391507960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |