Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq22 152 5e-32
seq3 118 1e-21
seq37 82.4 8e-11
>seq22
Length=92557
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||||| |||||||| |||||||||||||||||| |
Sbjct 76772 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 76831
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||||||||| | || ||||| || ||
Sbjct 76832 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 76890
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || |||||| ||| | ||||| || ||||| ||
Sbjct 76891 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 76950
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| |||||||| || ||||| ||||||||||||||
Sbjct 76951 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 147 bits (162), Expect = 2e-30
Identities = 178/240 (74%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | |||||||| |||||||||||||||||| |
Sbjct 77000 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 77059
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||||||||| | || ||||| || ||
Sbjct 77060 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 77118
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || |||||| ||| | ||||| || || || ||
Sbjct 77119 AATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAAC 77178
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725
|| | || ||||| |||||||| || ||||| ||||||||||||||| || || |||
Sbjct 77179 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTGACTTGGTT 77238
>seq3
Length=600384
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | || ||||||||||| |||||||||||| |
Sbjct 22039 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21980
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||| ||||| | || ||||| || ||
Sbjct 21979 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 21921
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | ||||| || || || ||
Sbjct 21920 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 21861
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| | ||| ||||||||||| || | ||||| || || |||||||||
Sbjct 21860 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 21812
>seq37
Length=3023111
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 8758 TTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAA 8817
|||||||||||| ||||||| | ||| || |||||| ||||| || ||||||
Sbjct 2501598 TTGCAATACGACTTGTGGAACAGAAAGCCAACTGAATTGTGGGATTGGGATGAATTGAAA 2501539
Query 8818 CGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCC 8877
|| |||| || |||| || | || || ||||||||||| ||||| || ||
Sbjct 2501538 GAAAAGCTTGCCAAACACGGTATGAGAAACTCCTTGTTGGTGGCTCCAATGCCTACTGCT 2501479
Query 8878 ACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
| || | ||||| |||| ||||| |||| || ||||| | ||| || | |||
Sbjct 2501478 TCTACATCACAAATTTTGGGTAACAATGAATGTTTCGAGCCATACACTTCAAATATTTAC 2501419
Query 8938 GTGAGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATC 8977
||| |||||||||| || || ||| ||| | ||||
Sbjct 2501418 TCTAGAAGAGTGTTGGCTGGTGAGTTTCAAATTGTTAATC 2501379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398166253240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |