Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq22 152 5e-32 seq3 118 1e-21 seq37 82.4 8e-11 >seq22 Length=92557 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || |||||| | ||||| |||||||| |||||||||||||||||| | Sbjct 76772 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 76831 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||| || ||||||||||| | || ||||| || || Sbjct 76832 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 76890 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||| || || |||||| ||| | ||||| || ||||| || Sbjct 76891 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 76950 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| |||||||| || ||||| |||||||||||||| Sbjct 76951 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998 Score = 147 bits (162), Expect = 2e-30 Identities = 178/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || |||||| | ||| | |||||||| |||||||||||||||||| | Sbjct 77000 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 77059 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||| || ||||||||||| | || ||||| || || Sbjct 77060 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 77118 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||| || || |||||| ||| | ||||| || || || || Sbjct 77119 AATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAAC 77178 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 || | || ||||| |||||||| || ||||| ||||||||||||||| || || ||| Sbjct 77179 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTGACTTGGTT 77238 >seq3 Length=600384 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || |||||| | ||| | || ||||||||||| |||||||||||| | Sbjct 22039 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21980 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||| || ||||| ||||| | || ||||| || || Sbjct 21979 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 21921 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | ||||| || || || || Sbjct 21920 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 21861 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | ||| ||||||||||| || | ||||| || || ||||||||| Sbjct 21860 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 21812 >seq37 Length=3023111 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 8758 TTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAA 8817 |||||||||||| ||||||| | ||| || |||||| ||||| || |||||| Sbjct 2501598 TTGCAATACGACTTGTGGAACAGAAAGCCAACTGAATTGTGGGATTGGGATGAATTGAAA 2501539 Query 8818 CGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCC 8877 || |||| || |||| || | || || ||||||||||| ||||| || || Sbjct 2501538 GAAAAGCTTGCCAAACACGGTATGAGAAACTCCTTGTTGGTGGCTCCAATGCCTACTGCT 2501479 Query 8878 ACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 | || | ||||| |||| ||||| |||| || ||||| | ||| || | ||| Sbjct 2501478 TCTACATCACAAATTTTGGGTAACAATGAATGTTTCGAGCCATACACTTCAAATATTTAC 2501419 Query 8938 GTGAGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATC 8977 ||| |||||||||| || || ||| ||| | |||| Sbjct 2501418 TCTAGAAGAGTGTTGGCTGGTGAGTTTCAAATTGTTAATC 2501379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398166253240