Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq37 361 8e-95
>seq37
Length=3023111
Score = 361 bits (400), Expect = 8e-95
Identities = 1189/1837 (65%), Gaps = 27/1837 (1%)
Strand=Plus/Plus
Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472
||||||||||| || || | ||| ||||||| || || ||||| ||||| | |||
Sbjct 2501081 TAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTA 2501140
Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532
||||||| || ||||| || | ||||| ||| |||||||| || ||
Sbjct 2501141 CCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCT 2501200
Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592
||||| | ||||| | ||||| |||||| | |||||||||| ||| || | |
Sbjct 2501201 CTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAAT 2501260
Query 68593 TGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATT 68649
||||| || ||||||| | | | | ||||||||| ||| | || |||||
Sbjct 2501261 GCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATG 2501320
Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGA 68709
|| |||| || | |||||||| | | | || ||| || | | | | |||
Sbjct 2501321 CTACTCTTCATAGCGTCATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGA 2501380
Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769
||||| |||||||| || |||| |||||||| | || ||||||||| || |||||
Sbjct 2501381 TTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGC 2501440
Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829
|| | | ||||||| || |||| |||||| | || || ||||| ||||| || ||||||
Sbjct 2501441 TCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACC 2501500
Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889
|| || ||||| | ||| ||| | | || ||||| | | | |||||||||
Sbjct 2501501 AACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCAC 2501560
Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949
| |||| ||| ||||| | |||||||| | | || | ||| |||
Sbjct 2501561 AATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTGAG 2501620
Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009
|| | || |||||||| || ||||| | | |||| |||| ||| || | |||
Sbjct 2501621 CCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCA 2501680
Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069
| | ||| |||||||| ||||| | |||| | || |||||| | ||| |||
Sbjct 2501681 GCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAAT 2501740
Query 69070 G-GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128
||| | |||| ||||||||||| ||||| || || || || | | || |||||
Sbjct 2501741 CCGATTCTC-AAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCT 2501799
Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188
|||||| | ||||| || |||||||| |||| || || || || ||| || | | |
Sbjct 2501800 GTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCT 2501859
Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATC 69244
||| | ||| || || ||||| ||||| | | ||| ||| | | || |
Sbjct 2501860 ATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGC 2501919
Query 69245 GT-----CCATC---TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296
| ||||| || ||| | | || | || || | |||||||| ||
Sbjct 2501920 ATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGC 2501979
Query 69297 TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356
|| |||| | | ||||| | || || ||| | || | |||| |||
Sbjct 2501980 AACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAAC 2502039
Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416
|||| ||||| || || ||| ||||||| || |||||||| | || || || ||
Sbjct 2502040 ACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGT 2502099
Query 69417 ACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGT 69476
|||||| ||| | || | || | || || | ||| | ||| || ||| | |
Sbjct 2502100 ACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATT--GTT 2502157
Query 69477 CTTGTA--ACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAA 69534
|| || ||| ||||| || |||| ||| | | | ||||| || || ||
Sbjct 2502158 TTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAA 2502217
Query 69535 ACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA 69594
|||| |||| ||| |||||||||| | | ||||| ||| || ||| | || |
Sbjct 2502218 GTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCA 2502277
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|||| ||||||||| | ||| || ||||| | |||| || | ||||| | |||| ||
Sbjct 2502278 ACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATT 2502337
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| || || || ||| ||| || | || || | ||||||| |||||||||
Sbjct 2502338 TCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGT 2502397
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774
|| ||||||| || | | || |||| || || || || ||||| | || | |||
Sbjct 2502398 TCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCA 2502457
Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834
||||| || | || | | ||| |||||||||||||| || |||| || || ||||
Sbjct 2502458 GTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCG 2502517
Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894
|| || || | | ||||| || ||| | || || || || || ||||
Sbjct 2502518 ATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTT 2502577
Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-T 69953
|| || | ||||| || || |||||||| ||||| || || ||| ||| ||| |
Sbjct 2502578 GAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATT 2502637
Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013
| | |||||| || | |||||||| | | | ||| || ||||| || || ||
Sbjct 2502638 GCAACCAAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGG 2502696
Query 70014 AGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTAT 70073
||| | ||||| || || ||| ||| | || |||||| || |||||| || | ||
Sbjct 2502697 AGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGAT 2502756
Query 70074 ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133
||| | ||| || || || || || | ||| | || || || |||| ||| |
Sbjct 2502757 ATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAAC 2502816
Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193
||| ||| || |||| |||||| | |||| |||||| || ||||| || |||||
Sbjct 2502817 TTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTA 2502876
Query 70194 --TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228
||||| || | || |||| ||| | || ||||
Sbjct 2502877 GTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2502911
Score = 315 bits (348), Expect = 1e-80
Identities = 607/885 (69%), Gaps = 24/885 (3%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| ||| ||| | ||| || || ||||| || || || |||| || |||||
Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442
||||| |||||||| ||||| || |||| || |||||| ||| || || |
Sbjct 2627549 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTAC--CCAAAGCAACCA 2627492
Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502
|| ||||| || ||||||||||| | ||| ||||| | |||||||||||| |
Sbjct 2627491 AT-AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2627433
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
| ||||||| | || || || | || |||||||| || || || || || || ||
Sbjct 2627432 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2627373
Query 39563 ATCGATGTTACTACCTCATCACTCGGT--GG---ATGCAATAAATGTTTAAACATTAAGC 39617
|| | || | || ||| | ||| || ||| |||||| ||||| ||||
Sbjct 2627372 AT---TCTTTCAACA--ATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGC 2627318
Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677
| || || ||| |||| || ||||| | || ||| ||||| || ||||| || | ||
Sbjct 2627317 ATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATC 2627258
Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737
| ||||||| || | ||| || | ||| || |||| |||||| |||||| || ||||
Sbjct 2627257 CTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGA 2627198
Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTA 39794
| || || || || ||||| ||||| | |||||| | | || ||| || || |
Sbjct 2627197 TACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAA 2627138
Query 39795 TCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853
|||| || || ||||||||||| ||||| || | ||| || ||||| ||||||||
Sbjct 2627137 TCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTG 2627079
Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913
|| | ||| ||| | ||| || | ||| || || || || | ||| ||
Sbjct 2627078 AATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTT 2627019
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
|||||||| |||||||| ||| || || || || ||||| || | ||||||| ||||
Sbjct 2627018 TCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATT 2626959
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| || || | | |||| ||||| |||| |||||||| || || |||||| || ||
Sbjct 2626958 TGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCG 2626899
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTAT---TCCAG 40090
||||| ||||| | | ||| ||| | |||||| | ||||||| | ||||
Sbjct 2626898 AAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAA 2626839
Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150
|||| | |||||| || ||| | |||||| || ||||| || || || || |||||
Sbjct 2626838 TCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTC 2626779
Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195
|||||||| | ||| || ||| | ||| || ||||| || |||
Sbjct 2626778 TTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626734
Score = 118 bits (130), Expect = 1e-21
Identities = 518/803 (65%), Gaps = 19/803 (2%)
Strand=Plus/Minus
Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421
|||||||| | || || || |||| | | || | || ||| |||| || |||||
Sbjct 921758 TCCTTATCAACAGTGAATTGGATGGCTCTCGCAGCAGCTTGTGTTCGTAAGTAATACATG 921699
Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481
|| ||||||| |||| ||| | | ||||| || || ||||| ||
Sbjct 921698 CCCGTTTTCAAACCTTTTTCCCAGGCATGAAAATGACAGCTGGTGAGTTTACCTATGGTT 921639
Query 68482 GGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGC 68540
|||| | || |||| ||||||||| ||| ||| |||||||| ||||||||||||
Sbjct 921638 GGATTCAGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCTCTATCTGC 921580
Query 68541 CGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600
||||| | ||| ||| |||||| | ||||||| || ||| | | | ||
Sbjct 921579 AGCCATATCTATGATATCCTTTTGTTTCAACTCCCAAACTGTTCGGTAAAGTTTTCTAAT 921520
Query 68601 ATCATCTGG-AAGGCTCG--TATTTTGAATGGATCCACCATCGGATATAATTAT-ATTCT 68656
||| | || | || | ||||||| || ||||||||||| || ||| | | ||
Sbjct 921519 ATCCCCAGGTATCACTGGTATATTTTGGATTGATCCACCATCTTGAATGATTTTGCTCCT 921460
Query 68657 TGAT-CTCATCATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAAC 68714
| || || | |||||| |||| | ||| ||| | || | ||||| | || ||
Sbjct 921459 TAATGCTGA--ATTCCA-AATTCCCAAATCCACCAAATCCCTTATGAGATACTTGTTCAC 921403
Query 68715 TATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 68774
| ||||||||| || |||| ||||| |||||| || | || ||| |||||||| |
Sbjct 921402 CACTTGAAATTCGCCTGATATCACTCGACGAGTATACAAGTTGGAGGTGTATGGTTCGAA 921343
Query 68775 AGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAA 68834
| | ||||| || | ||||||| ||||| ||||| ||||| || || || || |
Sbjct 921342 ACACTCATTGAACCCTAAGATTTGAGATGTTGAAGCAGTAGGCATGGGAGCTACTAAAAG 921283
Query 68835 ACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC-CCAAAGA- 68892
||||| | ||||| | | | |||||||||| || | ||| || || |||
Sbjct 921282 TGAGTTTCTCAACCCATGACTCCTCACATTATCTTTTAACTGATCCCAGTCATCATAGAA 921223
Query 68893 -TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCC 68951
|| |||| |||||| | ||| |||| | ||| || | || |||||
Sbjct 921222 TTC---TGGTTTTTGATTCCACATATCAAATTGCAAAATGCCTTGCGAAGCTGGAGATCC 921166
Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACC 69011
| | | ||| ||||| || || || || || |||| ||||||| ||| |
Sbjct 921165 AGCAAAGGTTGAGTAAGGACCCTCAAGTATAGATAATTCAAGTGAGGCCTCTACAGCAGC 921106
Query 69012 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG 69071
| ||| || ||||| || || | | |||||| | || || |||||| || |||||
Sbjct 921105 ATGATAGATGGTTTCAAAGATTTGCGAATTGAGTTTTTTAGCCTCTAGAGAGTCAAATGG 921046
Query 69072 ATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130
||| | || | |||| ||| || | || || || || ||| | || |||| ||
Sbjct 921045 -TAACCTCAATTCGAGAAATAAATCAGCTAGACCTTGTACGCCTATAGCTATTGGTCGAT 920987
Query 69131 GTCTCTTATTTGAACTTTCAGCT 69153
| || ||||| ||||| |||
Sbjct 920986 TCTTTTTGTTTGATCTTTCCGCT 920964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908482304680
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