Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq37 361 8e-95 >seq37 Length=3023111 Score = 361 bits (400), Expect = 8e-95 Identities = 1189/1837 (65%), Gaps = 27/1837 (1%) Strand=Plus/Plus Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472 ||||||||||| || || | ||| ||||||| || || ||||| ||||| | ||| Sbjct 2501081 TAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTA 2501140 Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532 ||||||| || ||||| || | ||||| ||| |||||||| || || Sbjct 2501141 CCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCT 2501200 Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592 ||||| | ||||| | ||||| |||||| | |||||||||| ||| || | | Sbjct 2501201 CTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAAT 2501260 Query 68593 TGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATT 68649 ||||| || ||||||| | | | | ||||||||| ||| | || ||||| Sbjct 2501261 GCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATG 2501320 Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGA 68709 || |||| || | |||||||| | | | || ||| || | | | | ||| Sbjct 2501321 CTACTCTTCATAGCGTCATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGA 2501380 Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 ||||| |||||||| || |||| |||||||| | || ||||||||| || ||||| Sbjct 2501381 TTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGC 2501440 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | | ||||||| || |||| |||||| | || || ||||| ||||| || |||||| Sbjct 2501441 TCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACC 2501500 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 || || ||||| | ||| ||| | | || ||||| | | | ||||||||| Sbjct 2501501 AACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCAC 2501560 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 | |||| ||| ||||| | |||||||| | | || | ||| ||| Sbjct 2501561 AATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTGAG 2501620 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || | || |||||||| || ||||| | | |||| |||| ||| || | ||| Sbjct 2501621 CCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCA 2501680 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 | | ||| |||||||| ||||| | |||| | || |||||| | ||| ||| Sbjct 2501681 GCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAAT 2501740 Query 69070 G-GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 ||| | |||| ||||||||||| ||||| || || || || | | || ||||| Sbjct 2501741 CCGATTCTC-AAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCT 2501799 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 |||||| | ||||| || |||||||| |||| || || || || ||| || | | | Sbjct 2501800 GTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCT 2501859 Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATC 69244 ||| | ||| || || ||||| ||||| | | ||| ||| | | || | Sbjct 2501860 ATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGC 2501919 Query 69245 GT-----CCATC---TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296 | ||||| || ||| | | || | || || | |||||||| || Sbjct 2501920 ATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGC 2501979 Query 69297 TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356 || |||| | | ||||| | || || ||| | || | |||| ||| Sbjct 2501980 AACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAAC 2502039 Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416 |||| ||||| || || ||| ||||||| || |||||||| | || || || || Sbjct 2502040 ACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGT 2502099 Query 69417 ACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGT 69476 |||||| ||| | || | || | || || | ||| | ||| || ||| | | Sbjct 2502100 ACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATT--GTT 2502157 Query 69477 CTTGTA--ACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAA 69534 || || ||| ||||| || |||| ||| | | | ||||| || || || Sbjct 2502158 TTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAA 2502217 Query 69535 ACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA 69594 |||| |||| ||| |||||||||| | | ||||| ||| || ||| | || | Sbjct 2502218 GTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCA 2502277 Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 |||| ||||||||| | ||| || ||||| | |||| || | ||||| | |||| || Sbjct 2502278 ACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATT 2502337 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| || || || ||| ||| || | || || | ||||||| ||||||||| Sbjct 2502338 TCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGT 2502397 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || ||||||| || | | || |||| || || || || ||||| | || | ||| Sbjct 2502398 TCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCA 2502457 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 ||||| || | || | | ||| |||||||||||||| || |||| || || |||| Sbjct 2502458 GTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCG 2502517 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || || | | ||||| || ||| | || || || || || |||| Sbjct 2502518 ATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTT 2502577 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-T 69953 || || | ||||| || || |||||||| ||||| || || ||| ||| ||| | Sbjct 2502578 GAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATT 2502637 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 | | |||||| || | |||||||| | | | ||| || ||||| || || || Sbjct 2502638 GCAACCAAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGG 2502696 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTAT 70073 ||| | ||||| || || ||| ||| | || |||||| || |||||| || | || Sbjct 2502697 AGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGAT 2502756 Query 70074 ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 ||| | ||| || || || || || | ||| | || || || |||| ||| | Sbjct 2502757 ATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAAC 2502816 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 ||| ||| || |||| |||||| | |||| |||||| || ||||| || ||||| Sbjct 2502817 TTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTA 2502876 Query 70194 --TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228 ||||| || | || |||| ||| | || |||| Sbjct 2502877 GTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2502911 Score = 315 bits (348), Expect = 1e-80 Identities = 607/885 (69%), Gaps = 24/885 (3%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | ||| || || ||||| || || || |||| || ||||| Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442 ||||| |||||||| ||||| || |||| || |||||| ||| || || | Sbjct 2627549 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTAC--CCAAAGCAACCA 2627492 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 || ||||| || ||||||||||| | ||| ||||| | |||||||||||| | Sbjct 2627491 AT-AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2627433 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | ||||||| | || || || | || |||||||| || || || || || || || Sbjct 2627432 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2627373 Query 39563 ATCGATGTTACTACCTCATCACTCGGT--GG---ATGCAATAAATGTTTAAACATTAAGC 39617 || | || | || ||| | ||| || ||| |||||| ||||| |||| Sbjct 2627372 AT---TCTTTCAACA--ATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGC 2627318 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 | || || ||| |||| || ||||| | || ||| ||||| || ||||| || | || Sbjct 2627317 ATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATC 2627258 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737 | ||||||| || | ||| || | ||| || |||| |||||| |||||| || |||| Sbjct 2627257 CTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGA 2627198 Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTA 39794 | || || || || ||||| ||||| | |||||| | | || ||| || || | Sbjct 2627197 TACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAA 2627138 Query 39795 TCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 |||| || || ||||||||||| ||||| || | ||| || ||||| |||||||| Sbjct 2627137 TCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTG 2627079 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || | ||| ||| | ||| || | ||| || || || || | ||| || Sbjct 2627078 AATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTT 2627019 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 |||||||| |||||||| ||| || || || || ||||| || | ||||||| |||| Sbjct 2627018 TCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATT 2626959 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | | |||| ||||| |||| |||||||| || || |||||| || || Sbjct 2626958 TGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCG 2626899 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTAT---TCCAG 40090 ||||| ||||| | | ||| ||| | |||||| | ||||||| | |||| Sbjct 2626898 AAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAA 2626839 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 |||| | |||||| || ||| | |||||| || ||||| || || || || ||||| Sbjct 2626838 TCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTC 2626779 Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195 |||||||| | ||| || ||| | ||| || ||||| || ||| Sbjct 2626778 TTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626734 Score = 118 bits (130), Expect = 1e-21 Identities = 518/803 (65%), Gaps = 19/803 (2%) Strand=Plus/Minus Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421 |||||||| | || || || |||| | | || | || ||| |||| || ||||| Sbjct 921758 TCCTTATCAACAGTGAATTGGATGGCTCTCGCAGCAGCTTGTGTTCGTAAGTAATACATG 921699 Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481 || ||||||| |||| ||| | | ||||| || || ||||| || Sbjct 921698 CCCGTTTTCAAACCTTTTTCCCAGGCATGAAAATGACAGCTGGTGAGTTTACCTATGGTT 921639 Query 68482 GGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGC 68540 |||| | || |||| ||||||||| ||| ||| |||||||| |||||||||||| Sbjct 921638 GGATTCAGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCTCTATCTGC 921580 Query 68541 CGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600 ||||| | ||| ||| |||||| | ||||||| || ||| | | | || Sbjct 921579 AGCCATATCTATGATATCCTTTTGTTTCAACTCCCAAACTGTTCGGTAAAGTTTTCTAAT 921520 Query 68601 ATCATCTGG-AAGGCTCG--TATTTTGAATGGATCCACCATCGGATATAATTAT-ATTCT 68656 ||| | || | || | ||||||| || ||||||||||| || ||| | | || Sbjct 921519 ATCCCCAGGTATCACTGGTATATTTTGGATTGATCCACCATCTTGAATGATTTTGCTCCT 921460 Query 68657 TGAT-CTCATCATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAAC 68714 | || || | |||||| |||| | ||| ||| | || | ||||| | || || Sbjct 921459 TAATGCTGA--ATTCCA-AATTCCCAAATCCACCAAATCCCTTATGAGATACTTGTTCAC 921403 Query 68715 TATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 68774 | ||||||||| || |||| ||||| |||||| || | || ||| |||||||| | Sbjct 921402 CACTTGAAATTCGCCTGATATCACTCGACGAGTATACAAGTTGGAGGTGTATGGTTCGAA 921343 Query 68775 AGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAA 68834 | | ||||| || | ||||||| ||||| ||||| ||||| || || || || | Sbjct 921342 ACACTCATTGAACCCTAAGATTTGAGATGTTGAAGCAGTAGGCATGGGAGCTACTAAAAG 921283 Query 68835 ACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC-CCAAAGA- 68892 ||||| | ||||| | | | |||||||||| || | ||| || || ||| Sbjct 921282 TGAGTTTCTCAACCCATGACTCCTCACATTATCTTTTAACTGATCCCAGTCATCATAGAA 921223 Query 68893 -TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCC 68951 || |||| |||||| | ||| |||| | ||| || | || ||||| Sbjct 921222 TTC---TGGTTTTTGATTCCACATATCAAATTGCAAAATGCCTTGCGAAGCTGGAGATCC 921166 Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACC 69011 | | | ||| ||||| || || || || || |||| ||||||| ||| | Sbjct 921165 AGCAAAGGTTGAGTAAGGACCCTCAAGTATAGATAATTCAAGTGAGGCCTCTACAGCAGC 921106 Query 69012 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG 69071 | ||| || ||||| || || | | |||||| | || || |||||| || ||||| Sbjct 921105 ATGATAGATGGTTTCAAAGATTTGCGAATTGAGTTTTTTAGCCTCTAGAGAGTCAAATGG 921046 Query 69072 ATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130 ||| | || | |||| ||| || | || || || || ||| | || |||| || Sbjct 921045 -TAACCTCAATTCGAGAAATAAATCAGCTAGACCTTGTACGCCTATAGCTATTGGTCGAT 920987 Query 69131 GTCTCTTATTTGAACTTTCAGCT 69153 | || ||||| ||||| ||| Sbjct 920986 TCTTTTTGTTTGATCTTTCCGCT 920964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908482304680