Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq37 262 3e-65
>seq37
Length=3023111
Score = 262 bits (290), Expect = 3e-65
Identities = 594/878 (68%), Gaps = 35/878 (4%)
Strand=Plus/Plus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| ||||||| ||| ||| ||||| || |||||||||||||| || || | || ||
Sbjct 2626734 TGTCATGTTTCCTATTAGATACCATGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATC 2626793
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGC--AT 43817
||| ||||| ||||||||| ||||||| |||||| ||| || |||||| | |
Sbjct 2626794 ATTCTGGACTGCAGAAGAAATTGATTTAGGTAAAGATCTT--CATGATTGGAGAGAGAAA 2626851
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGG-----TTTTGGCGTTTTTTGCTGCGAG 43872
| || |||| ||| |||| | |||| | ||||| ||||| |||||
Sbjct 2626852 TTGAATGACAATGAAAGGTTTTT----CATTGGAAGAATCTTGGCCTTTTTCGCTGCCTC 2626907
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932
|| || || || |||||||| ||||| ||| | ||||||||| | || ||
Sbjct 2626908 TGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCTGCTGAAGTTCAAATTCCTGA 2626967
Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA--C 43990
||| || |||||||| || ||||| || ||||| |||||||| |||| || |
Sbjct 2626968 AGCCAAATCATTTTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACTTATTC 2627027
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATG 44048
| | || ||| || || || ||||| ||| || ||||| || || || ||||
Sbjct 2627028 ATTATT--GATTGAAACTTATATCAAGGATC--CAAAGGAAGCCGATTTCTTATTCAATG 2627083
Query 44049 CGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AA 44105
| || ||||| | ||| |||||| | || || || |||||| | | |||||| |
Sbjct 2627084 CTATTGAAACCATCCCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCAAG 2627143
Query 44106 ATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCT 44165
|||| ||| | |||| || || | || || ||||| | ||| || || || ||
Sbjct 2627144 ATTCCGATGCATTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCTT-- 2627201
Query 44166 TTTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
|||||| |||||||||| |||| || ||||| ||||| |||| || ||||| || ||
Sbjct 2627202 TTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATT 2627261
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
||| ||||| ||||| || || ||||||||||||| ||||| |||||||| |||||
Sbjct 2627262 GACCTTTTCCAATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGCATGCTT 2627321
Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATT-ACAGATATTGTTG 44342
||| ||| || | | | ||| ||| |||| || | ||| ||| ||
Sbjct 2627322 GTTGTTTGCTCATTT---ACAACATAGACCTGACCCAAAGATTGTTGAAAGA-ATTATTA 2627377
Query 44343 TAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAG 44402
|| ||||| | || ||| ||||||| | || ||||| || || | ||| | |
Sbjct 2627378 CTGAAGCAGTTGAAATTGAAAAAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGG 2627437
Query 44403 GAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGG 44462
|||||||| |||||| |||||| |||||| |||| || | ||| | | |
Sbjct 2627438 GAATGAATTGTAAGTTGATGTGTCAATATGTTGAATTTGTTGCCGACAGATTATTGGTTG 2627497
Query 44463 AACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTT 44522
||||| | | ||| || | ||| || || |||||||||||||| ||||| |
Sbjct 2627498 CTTTGGGTAACAAAAAAGTTTACAATGTCACCAATCCATTTGATTTTATGGAGAATATCT 2627557
Query 44523 CGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTT 44560
| |||| || || || || || ||||||||| | |||
Sbjct 2627558 CCTTGGCTGGTAAGACCAATTTCTTTGAAAAAAGAGTT 2627595
Score = 156 bits (172), Expect = 3e-33
Identities = 303/445 (68%), Gaps = 12/445 (3%)
Strand=Plus/Minus
Query 19430 CCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| ||||| ||||| || ||||| || | |||||| || ||| || |||||||||
Sbjct 534445 CCAAAGATTGTTAATGGACCCGAAATGTTGAGTAAATACGTTGGTGCGTCTGAAGAAAAT 534386
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGG-GCGCAAAAGTTC 19547
| || |||||| |||||||||| ||| | |||| | ||| | | | | |
Sbjct 534385 ATTCGTAATTTGTTCAAGGACGCTGAAGCTGAATATAAACTTAAAGGTGAGGACTCGGAC 534326
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--- 19604
|| |||| |||| || | |||||||| || | | | ||| || |||||||||||
Sbjct 534325 TT-GCACGTTATTATTTTTGATGAATTAGATTCCGTTTTTAAACAGAGAGGTTCTGGAAA 534267
Query 19605 ------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
| || || || ||||| |||||| |||||| | ||||||| | || ||
Sbjct 534266 GAGTGACGGAACAGGGGTTGGTGACAATGTTGTGAATCAATTGTTGTCAAAGATGGATGG 534207
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| | || |||| |||||| | || ||||| ||||| |||||||| || || || ||
Sbjct 534206 TGTTGATCAGTTGAACAATATTCTTGTCATTGGTATGACCAATAGACTCGACTTGATTGA 534147
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
| || || || |||| ||| | || ||||| |||| || ||| ||||| |||||
Sbjct 534146 TACTGCATTGTTGAGACCTGGTAGATTTGAAATTCAGATTGAGATTGCTTTACCAGATGA 534087
Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTT 19838
| || | ||| || || | ||||||||| || || || ||||| | | ||
Sbjct 534086 AAAAGGTAGAAAGGATATCTTTATGATACATACAAAAAAGTTGAGAGAAAATGGCTTGTT 534027
Query 19839 AAATGACGATGTAGATCTAGAAGAA 19863
|| | | ||||| |||| || |||
Sbjct 534026 AACTAAGGATGTCAATCTTGATGAA 534002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455820772185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |