Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq37 219 5e-52 seq16 109 7e-19 >seq37 Length=3023111 Score = 219 bits (242), Expect = 5e-52 Identities = 850/1323 (64%), Gaps = 41/1323 (3%) Strand=Plus/Plus Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728 || ||||| ||||||||| || | |||||| ||| || |||| |||||||| Sbjct 2501381 TTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGC 2501440 Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788 || || |||||||| |||||||| ||||||| || || || || |||||||| |||| | Sbjct 2501441 TCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACC 2501500 Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTG-ATGCGTTCCTTGAGAA-CATCCCAGTCGT 110846 || | ||| | | ||| | | | | | || || ||| | ||||||| || Sbjct 2501501 AACAAGGAGTTTCTCATACCGTGTT--TGGCAAGCTTTTCTTTCAATTCATCCCAATCCC 2501558 Query 110847 AG--TTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGG 110904 | || || | | |||| | ||||| ||| | || | || ||||| || || || Sbjct 2501559 ACAATTCAGTTGGCTTTCTGTT--CCACAAGTCGTATTGCAACAAACCTTGCGATGCTGG 2501616 Query 110905 AGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC---AATTCACAGCTCGCCTC 110961 || || | | |||||||||| ||||| |||| ||| |||||| || || Sbjct 2501617 TGAGCCTTGGTAAGTTTCATAGGGACCTT---CTTCCGCCGCTAATTCAATTGATGCTTC 2501673 Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 111021 | | || ||||| || |||||||| || || ||||| ||| | ||||| | || Sbjct 2501674 AACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGA 2501733 Query 111022 ATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 111081 ||||||| || | | | |||||| |||| || | ||||| |||||||| |||| Sbjct 2501734 ATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAAT 2501793 Query 111082 AGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTC 111138 |||||||||| ||| || || || | ||| ||| || || || | |||| || Sbjct 2501794 TGGTCTGTGTCTCATGTTTGA---TCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATC 2501850 Query 111139 AATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT- 111197 |||||||| || | ||| ||||||| || |||| ||||| | || ||| | | Sbjct 2501851 AATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTT 2501910 Query 111198 ----CAAAAGTGCG----AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 111249 ||| ||| | || ||| | | | | || | || || || ||||| Sbjct 2501911 GTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAA---GGTAAAGCAATCGAAGCCAA 2501967 Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 || |||||||| ||||| | | || || | |||||| ||| |||||||| Sbjct 2501968 GTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGA 2502027 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 | ||||| |||||||| |||||||| ||| |||| || ||||||||||| | Sbjct 2502028 AGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAA 2502087 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGC 111429 |||| | || || || ||||| || |||| | | || | | ||| | | || Sbjct 2502088 CATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGC 2502147 Query 111430 TGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 | | | || || || | || || |||||| || || | | |||| Sbjct 2502148 T--TTGATTGTTTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAAT 2502205 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547 || ||||| | || | | ||| || | | |||| |||| | | ||| | | Sbjct 2502206 TCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCA 2502265 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 ||| || |||||| | ||||| || | ||||| ||||||| | || || | ||| Sbjct 2502266 CCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCT 2502325 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 ||| | | ||||| | ||| ||||| || | |||| ||| || | |||||| Sbjct 2502326 CTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCA 2502385 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723 ||||||||||| |||||||| | || | || || || | | ||| |||||| Sbjct 2502386 GCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGATC 2502444 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| || || ||| ||| || || |||| ||||||||||||||||| ||| ||| Sbjct 2502445 CACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACC 2502504 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || || | | ||| | | | ||||| |||| |||||||| Sbjct 2502505 GTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACC 2502564 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 ||||| | ||||| || ||||| | | | ||| |||| ||||| | || || Sbjct 2502565 ACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGA 2502624 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963 || || || | || | | ||| ||| ||||| || ||| |||| ||||| ||||| Sbjct 2502625 ATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCATT 2502684 Query 111964 GAA 111966 ||| Sbjct 2502685 GAA 2502687 Score = 109 bits (120), Expect = 7e-19 Identities = 349/531 (66%), Gaps = 29/531 (5%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||| ||||| || |||| | |||||| || ||| | ||| Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 ||||| | || | |||||||||||| |||| | ||| || || || ||| ||||| Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCA-AACGATCCACTGAAAAAGAT 2627197 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA----GGAGCGAGACTTTGCAT 122833 |||||| ||| ||||| |||| | | || || || | | || || | | | Sbjct 2627196 ACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCG-GAAT---CTT 2627141 Query 122834 CAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 122893 || |||| | || ||||| | |||||||| | ||| || | |||| || || | Sbjct 2627140 GAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCAT 2627081 Query 122894 CAAATAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGA 122948 ||||| | ||||| || | |||||| || || | ||||||||| ||| Sbjct 2627080 TGAATAAGAAATCGGCTTCCTT-----TGGATCCTTGATATAAGTTTCAATCAATAATGA 2627026 Query 122949 ATATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTT 123007 ||| ||||| ||||| ||| ||| || | ||| | | || ||||| |||| Sbjct 2627025 ATAAGTTTCTGAATGAATGTTTTCCATCAT-GATTTGGAAACCATAAAATGATTTGGCTT 2626967 Query 123008 CGCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 123067 | || ||||| ||| | | ||| || | | || ||| |||||| ||||| | Sbjct 2626966 CAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAG 2626907 Query 123068 ACCCAGCAAAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCAGGGT 123125 | |||| || || |||| || | ||| ||||| | ||||||| ||||||| | Sbjct 2626906 AGGCAGCGAAAAAGGCCAAGA--TTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTT 2626849 Query 123126 CT---TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 || |||| || | ||||||||| ||||||| |||||| |||||||| Sbjct 2626848 CTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCA 2626798 >seq16 Length=320745 Score = 109 bits (120), Expect = 7e-19 Identities = 188/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 164590 TGCCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTA 164649 |||| | |||| ||||||||||| ||||| || || || || ||||| || ||||||| Sbjct 6580 TGCCTATTGGTACATATGGTCGTGTGGCACCTCGTTCGGGGCTTGCTGTCAAACATGGTA 6521 Query 164650 TTCAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCT 164709 || | |||||| ||||| ||||| | || ||| ||||||||| ||||| || | | Sbjct 6520 TTTCAACTGGTGCAGGTGTCATTGACGCTGATTATCGAGGTGAAGTTAAAGTTGTCTTGT 6461 Query 164710 TCAATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCC 164769 |||| || || || ||||||| || || || || ||| | || || ||| | || Sbjct 6460 TCAACCATTCTGAAAAGAACTTTGATGTTAAAAAGGGCGATAGAATTGCTCAATTGGTTT 6401 Query 164770 TTGAGCGCTGTGAAACACCCGATGTGGAGGAAATT-----GGTGTTCTTGAAGAG-ACGG 164823 | || | || | | ||| | || |||||| || |||| ||| || | Sbjct 6400 TAGAAAGAATTGTTAATGCTGATATTGAAGAAATTACTGAGGAAGCATTGACGAGCACTG 6341 Query 164824 AGAGAGGTGCGGGTGGATTTGGATCTACTGGT 164855 || |||||| |||||||||||||| || ||| Sbjct 6340 AGCGAGGTGAAGGTGGATTTGGATCCACAGGT 6309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031709535200