Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq37 159 4e-34 seq2 84.2 3e-11 >seq37 Length=3023111 Score = 159 bits (176), Expect = 4e-34 Identities = 457/700 (65%), Gaps = 16/700 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | ||||||||||| || || |||||||||||||| ||||| | ||| || Sbjct 2501420 TAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAA 2501479 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || |||| | | | ||| | | ||| | || || ||| Sbjct 2501480 GCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCT 2501539 Query 118302 TTGAGAGCGTCCCAGTCGTAG--TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359 || | | ||||| || | || || ||| || | | ||||| || | || | Sbjct 2501540 TTCAATTCATCCCAATCCCACAATTCAG--TTGGCTTTCTGTTCCACAAGTCGTATTGCA 2501597 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 | |||||| || ||||| || || | | || ||||| || || || || |||| | Sbjct 2501598 ACAAACCTTGCGATGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTA 2501657 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 |||| || || | || || ||||| |||||||||||||| || ||||| | Sbjct 2501658 ATTCAATTGATGCTTCAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATT 2501717 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 || | || || | ||||||||| ||| || | | |||||| |||| || | |||| Sbjct 2501718 CCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTT 2501777 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGAT 118599 ||||||| | | ||||||| | |||||||| || || || ||| || || | Sbjct 2501778 GGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGT 2501837 Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659 | | || | ||| || || ||||| | ||| || ||||| || |||| ||||| | Sbjct 2501838 AGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCA 2501897 Query 118660 GCTTTTC---GT------AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710 ||| || || || || | | | || ||| | | | | ||| | | Sbjct 2501898 ACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGA---AGGTAAAG 2501954 Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770 | || || |||| ||||| |||| ||||| | | || || | |||||| Sbjct 2501955 CAATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCAC 2502014 Query 118771 TGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 118830 |||||||| ||| ||||| ||||| || ||||| || ||||| |||||||| | Sbjct 2502015 AACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAG 2502074 Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 |||||||||| | |||| |||| || || ||||| ||||| Sbjct 2502075 CATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTG 2502114 Score = 84.2 bits (92), Expect = 3e-11 Identities = 364/564 (65%), Gaps = 29/564 (5%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||| || ||||| | || | |||||| || ||| || ||| Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | || | |||||||||||||||||| | | ||| || ||| ||| ||||| Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2627196 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA----GGAGCGGGACTTTGTATC 130191 ||||| ||| || || |||| | | ||||||||| | | ||| | ||| Sbjct 2627195 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTG---- 2627140 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 || ||| | || ||||| | ||||| || | || |||| ||| | || || || Sbjct 2627139 AATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATT 2627080 Query 130251 CA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 130306 | |||| || |||| || |||||| ||||| || | || || | | |||| Sbjct 2627079 GAATAAGAAATCGGCTTCCTT-----TGGATCCTTGATATAAGTTTCAATCAATAATGAA 2627025 Query 130307 TATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 130365 || ||||| ||| | ||| ||| ||| || || | || || || ||||| Sbjct 2627024 TAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAAC-CATAAAATGATTTGGCTTC 2626966 Query 130366 GCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 130425 || || || ||| | | ||| || | | || ||| |||||| ||||| || Sbjct 2626965 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2626906 Query 130426 CCCAGCAAAAAACGCCAGGATATACTT--TATGAATTTCTGTTCATTCTCGTTCAGGGTC 130483 |||| ||||| |||| | || ||| ||||| | |||||| || |||| || Sbjct 2626905 GGCAGCGAAAAAGGCCA--AGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTC 2626848 Query 130484 T---TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCAT 130539 | |||| || | |||||| || | ||| | || || |||||||| | || | Sbjct 2626847 TCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT-GC 2626789 Query 130540 TTGAGCCTTCTTATAGAGTTCCCA 130563 || ||||||||| || | || ||| Sbjct 2626788 TTCAGCCTTCTTGTACATTTGCCA 2626765 >seq2 Length=358706 Score = 84.2 bits (92), Expect = 3e-11 Identities = 212/320 (66%), Gaps = 2/320 (1%) Strand=Plus/Plus Query 14148 TATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG 14207 ||||||| || ||||| ||| ||| | |||||| | ||| | ||| || |||||||| Sbjct 130605 TATCAAACCCGTCCATTTCAACCAATAATTGATTCAAGGTGTTTTCACGCTCATCATTGC 130664 Query 14208 CAGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGA 14267 || ||||| ||| || | || ||||| | || ||||| ||||| | |||| || Sbjct 130665 CACCCATACGACCATTACCTCTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGA 130724 Query 14268 TACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327 | ||| | || | || || || | ||| || || | | ||||| |||| Sbjct 130725 TTGCTGGGGCCATATCCCTTGCCGTTTTGAATAAATCACGTACACGCGATGCACCAACAC 130784 Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGG-AACATTGGATGAAGGGGACGTTAGATTCA 14386 | ||||||||||| ||||| | | ||| |||| | || || || || | |||| Sbjct 130785 CAACAAACATCTCAACAAATTCCGATCCGGAAACACT-GAGAAAAGGTACACCTGCTTCA 130843 Query 14387 CCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCA 14446 || || | ||| || | | |||||| || || || || ||| | | || ||| Sbjct 130844 CCAGCAGTTGCTTTTGCCAACAAGGTCTTACCTGTACCAGGAGGCCCCGACAAAATTGCA 130903 Query 14447 CCACGTGGGATCCTGGCACC 14466 ||||| |||||| ||||||| Sbjct 130904 CCACGAGGGATCTTGGCACC 130923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434913973720