Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 2e-26
seq37 127 2e-24
seq22 100 3e-16
>seq3
Length=600384
Score = 134 bits (148), Expect = 2e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||||||||| || ||||| || || || || ||| | || |||||||||
Sbjct 21812 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 21871
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| | ||| | || || || |||||||| ||||| || ||||| ||
Sbjct 21872 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 21931
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 21932 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 21991
Query 27585 TGTCCAAAAGGAATCCACT 27603
||||||||||||| |||
Sbjct 21992 CATCCAAAAGGAATCTACT 22010
>seq37
Length=3023111
Score = 127 bits (140), Expect = 2e-24
Identities = 661/1043 (63%), Gaps = 35/1043 (3%)
Strand=Plus/Plus
Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784
||||||| ||| || || || | ||| || || | ||| | | |||| |||| ||| ||
Sbjct 2501765 TCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCT 2501824
Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844
|| |||| |||||| |||| ||| ||||| | |||| || |||||||||||
Sbjct 2501825 TCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTG 2501884
Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTC------ACAAAT 80892
|| || ||||| | || | ||||| | | || || || | | | |||
Sbjct 2501885 GTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAA 2501944
Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951
| || || || | || |||| || || || || || || || | | | | | ||
Sbjct 2501945 GAAGGTAAAGCA-ATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTC 2502003
Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011
|| ||||| ||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct 2502004 AACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTT 2502063
Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071
|| ||| ||||| |||||||| ||||| | |||||||| ||||| |||| || |
Sbjct 2502064 GGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAA 2502123
Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131
||||| | ||| | | | || |||| || | ||||| | | ||
Sbjct 2502124 GATGGAATACCACAATTTTTGAGCTTTGATTGTTTTTCTACCACGACCTTCTTTCTCGTA 2502183
Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGT 81190
|| | || || | || | | |||| | |||| |||| | || ||| || |
Sbjct 2502184 TTTCTCATACAACTCAACAAATTCGTCACCAT-AAGTATCAGCCAAGTTTGGAGCTTCAT 2502242
Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250
| || | | || ||| || | | ||| || ||||| || || ||||
Sbjct 2502243 TTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGA 2502302
Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTGGTTGAGGCG 81308
|||| | || | ||||| ||| | ||| | | | || | ||| ||||| |
Sbjct 2502303 TCCACAAAGCTGGGAACAAGTCTCT--AGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2502360
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368
| || | ||||| | ||| || || |||||||| || ||||| | || | | ||
Sbjct 2502361 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2502420
Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
|||| || |||| || | || ||||| ||||| ||| || ||||| |
Sbjct 2502421 TGGTCTCTTGTTAC---CACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAAC 2502477
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||||| ||| |||||| ||||| |||| | || ||| ||
Sbjct 2502478 CATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACG 2502537
Query 81483 CACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || || || || ||||| | | ||||||||| ||||| |
Sbjct 2502538 AATGTTGTGGATATGCAAT-CCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCT 2502596
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
| | || |||||||| || || || ||||| |||||| ||| ||||||||| ||
Sbjct 2502597 TTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATG 2502656
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || |||| ||| ||||||||||||| ||| | | ||| | || ||
Sbjct 2502657 ACATTTGTGG--TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTA 2502714
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| | ||||||| | || || || | || | ||| ||||| || || |||||
Sbjct 2502715 TCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGGATACC 2502774
Query 81720 GATAGCTACACGCATAAACATGT 81742
||||| || | ||||| || ||
Sbjct 2502775 AATAGCAACTCTCATAATCAAGT 2502797
>seq22
Length=92557
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || ||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 77227 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 77168
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| || | || | || || || ||||| || || ||||| ||||| ||
Sbjct 77167 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 77108
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 77107 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 77048
Query 27585 TGTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 77047 CATTCAAAAAGAATCCAC 77030
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || || | |||||||| |||
Sbjct 76998 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 76939
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 76938 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 76879
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 76878 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 76819
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 76818 ATTCAAAAAGAATCCAC 76802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310136231440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |