Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-26 seq37 127 2e-24 seq22 100 3e-16 >seq3 Length=600384 Score = 134 bits (148), Expect = 2e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||||||||| || ||||| || || || || ||| | || ||||||||| Sbjct 21812 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 21871 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | ||| | || || || |||||||| ||||| || ||||| || Sbjct 21872 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 21931 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 21932 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 21991 Query 27585 TGTCCAAAAGGAATCCACT 27603 ||||||||||||| ||| Sbjct 21992 CATCCAAAAGGAATCTACT 22010 >seq37 Length=3023111 Score = 127 bits (140), Expect = 2e-24 Identities = 661/1043 (63%), Gaps = 35/1043 (3%) Strand=Plus/Plus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 ||||||| ||| || || || | ||| || || | ||| | | |||| |||| ||| || Sbjct 2501765 TCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCT 2501824 Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844 || |||| |||||| |||| ||| ||||| | |||| || ||||||||||| Sbjct 2501825 TCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTG 2501884 Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTC------ACAAAT 80892 || || ||||| | || | ||||| | | || || || | | | ||| Sbjct 2501885 GTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAA 2501944 Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 | || || || | || |||| || || || || || || || | | | | | || Sbjct 2501945 GAAGGTAAAGCA-ATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTC 2502003 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 || ||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 2502004 AACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTT 2502063 Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071 || ||| ||||| |||||||| ||||| | |||||||| ||||| |||| || | Sbjct 2502064 GGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAA 2502123 Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131 ||||| | ||| | | | || |||| || | ||||| | | || Sbjct 2502124 GATGGAATACCACAATTTTTGAGCTTTGATTGTTTTTCTACCACGACCTTCTTTCTCGTA 2502183 Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGT 81190 || | || || | || | | |||| | |||| |||| | || ||| || | Sbjct 2502184 TTTCTCATACAACTCAACAAATTCGTCACCAT-AAGTATCAGCCAAGTTTGGAGCTTCAT 2502242 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 | || | | || ||| || | | ||| || ||||| || || |||| Sbjct 2502243 TTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGA 2502302 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTGGTTGAGGCG 81308 |||| | || | ||||| ||| | ||| | | | || | ||| ||||| | Sbjct 2502303 TCCACAAAGCTGGGAACAAGTCTCT--AGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2502360 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 | || | ||||| | ||| || || |||||||| || ||||| | || | | || Sbjct 2502361 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2502420 Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 |||| || |||| || | || ||||| ||||| ||| || ||||| | Sbjct 2502421 TGGTCTCTTGTTAC---CACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAAC 2502477 Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 ||| || || ||||||| ||| |||||| ||||| |||| | || ||| || Sbjct 2502478 CATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACG 2502537 Query 81483 CACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | ||| ||| || || || || ||||| | | ||||||||| ||||| | Sbjct 2502538 AATGTTGTGGATATGCAAT-CCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCT 2502596 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 | | || |||||||| || || || ||||| |||||| ||| ||||||||| || Sbjct 2502597 TTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATG 2502656 Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 |||| || || |||| ||| ||||||||||||| ||| | | ||| | || || Sbjct 2502657 ACATTTGTGG--TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTA 2502714 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | | ||||||| | || || || | || | ||| ||||| || || ||||| Sbjct 2502715 TCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGGATACC 2502774 Query 81720 GATAGCTACACGCATAAACATGT 81742 ||||| || | ||||| || || Sbjct 2502775 AATAGCAACTCTCATAATCAAGT 2502797 >seq22 Length=92557 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || ||||| || | ||||| ||||| || || | |||||||||||| Sbjct 77227 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 77168 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | || | || || || ||||| || || ||||| ||||| || Sbjct 77167 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 77108 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | |||||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 77107 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 77048 Query 27585 TGTCCAAAAGGAATCCAC 27602 | ||||| |||||||| Sbjct 77047 CATTCAAAAAGAATCCAC 77030 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | ||||| ||||| || || | |||||||| ||| Sbjct 76998 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 76939 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||| || || ||||| ||||| || Sbjct 76938 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 76879 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 76878 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 76819 Query 27586 GTCCAAAAGGAATCCAC 27602 | ||||| |||||||| Sbjct 76818 ATTCAAAAAGAATCCAC 76802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310136231440