Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq22 143 2e-29
seq3 127 1e-24
>seq22
Length=92557
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| ||||| | || || || || ||||| | || ||||| || |
Sbjct 76998 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 76939
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | ||| | || | | |||||||||||| | || ||||||||
Sbjct 76938 GACACTATTGACAATGTCAAATCCAAGA-TCCAAGACAAAGAAGGTATTCCACCAGATCA 76880
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || |||||| ||||||| | | ||||| ||| |||||
Sbjct 76879 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 76820
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| |||||||| ||||||||||| || || || || ||| |||| ||
Sbjct 76819 CATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 76772
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| |||||||| ||||| | || || || || ||||| | || ||||| || |
Sbjct 77227 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 77168
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| | | ||| || || |||||||||||| | || ||||||||
Sbjct 77167 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 77108
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || |||||| ||||||| | | ||||| ||| |||||
Sbjct 77107 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 77048
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| |||||||| |||||||| || || || || || ||| |||| ||
Sbjct 77047 CATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 77000
>seq3
Length=600384
Score = 127 bits (140), Expect = 1e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || || |||||||| ||||| ||||| |||||| | |||||||| || |
Sbjct 21812 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 21871
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| |||| ||| | || | || | | ||||| ||||| | || |||||||
Sbjct 21872 TGACACCATTGACAATGTCAAGTCCAAGA-TCCAAGACAAGGAAGGAATCCCACCAGATC 21930
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | || || ||||| || |||||| ||||||| | | ||||| ||| ||||
Sbjct 21931 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACA 21990
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||| ||||| || || || || || || || || || ||| |||| ||
Sbjct 21991 ACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009447578796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |