Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq37 271 7e-68
>seq37
Length=3023111
Score = 271 bits (300), Expect = 7e-68
Identities = 605/897 (67%), Gaps = 27/897 (3%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || || |||| ||||| |||||||| || || || | ||
Sbjct 2627618 ACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAG 2627559
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA---TGTTTTTCACACTTT 4364
|| ||||| |||||||||||||| ||||| || | |||||| | ||| | || |
Sbjct 2627558 GAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC--- 2627502
Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424
| ||| || | |||| ||| || |||||||| | ||| || | ||| | | || ||
Sbjct 2627501 AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTC 2627442
Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484
||||| | || || || || | || | || || || |||| ||| || || |||
Sbjct 2627441 ATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCT 2627382
Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACA 4542
|| || || || ||||| | |||||| | | ||| ||| | ||| | ||||||
Sbjct 2627381 TCAGTAATAAT-TCTTTCA-ACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACA 2627324
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
| || || ||||||||| || |||||||| || | | ||||| ||| || ||||| |
Sbjct 2627323 ACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGG 2627264
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| ||||| |||||||| |||||||| || | ||| || || | ||||| || ||| |
Sbjct 2627263 TCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGA 2627204
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG- 4721
| || || || || || || ||||| || || |||| | ||| | || | |
Sbjct 2627203 AAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAA--TGCATCGGA 2627146
Query 4722 -TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
|||| ||||||| | | ||||| | ||| || || |||| || || || | ||
Sbjct 2627145 ATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAAT 2627086
Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
||| || ||||| | ||| ||| || | |||||||| || || | ||
Sbjct 2627085 AGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2627026
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
||| |||| ||||| || ||||| || || || || || ||||| || | |||||
Sbjct 2627025 ATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTC 2626966
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
| | ||||||||| | |||| |||| || |||||||| || || ||||| |||
Sbjct 2626965 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2626906
Query 4961 GGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGT 5015
||| || ||||| ||||| | | | || ||| || ||| |||| || | |
Sbjct 2626905 GGCAGCGAAAAAGGCCAAGATTCTTCCAATGAAAA--ACCTTTCATTGTCA---TTCAAT 2626851
Query 5016 TT---TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC 5072
|| | |||| | | | ||||||| |||||||| |||||| ||||||| || ||
Sbjct 2626850 TTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT 2626791
Query 5073 GCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129
||||| || || |||||||| |||||| ||| | || ||| |||| ||||||
Sbjct 2626790 GCTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049407427321
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |