Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq37 271 7e-68 >seq37 Length=3023111 Score = 271 bits (300), Expect = 7e-68 Identities = 605/897 (67%), Gaps = 27/897 (3%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||| |||||||| || || || | || Sbjct 2627618 ACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAG 2627559 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA---TGTTTTTCACACTTT 4364 || ||||| |||||||||||||| ||||| || | |||||| | ||| | || | Sbjct 2627558 GAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC--- 2627502 Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424 | ||| || | |||| ||| || |||||||| | ||| || | ||| | | || || Sbjct 2627501 AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTC 2627442 Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484 ||||| | || || || || | || | || || || |||| ||| || || ||| Sbjct 2627441 ATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCT 2627382 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACA 4542 || || || || ||||| | |||||| | | ||| ||| | ||| | |||||| Sbjct 2627381 TCAGTAATAAT-TCTTTCA-ACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACA 2627324 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 | || || ||||||||| || |||||||| || | | ||||| ||| || ||||| | Sbjct 2627323 ACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGG 2627264 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | ||||| |||||||| |||||||| || | ||| || || | ||||| || ||| | Sbjct 2627263 TCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGA 2627204 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG- 4721 | || || || || || || ||||| || || |||| | ||| | || | | Sbjct 2627203 AAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAA--TGCATCGGA 2627146 Query 4722 -TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780 |||| ||||||| | | ||||| | ||| || || |||| || || || | || Sbjct 2627145 ATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAAT 2627086 Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 ||| || ||||| | ||| ||| || | |||||||| || || | || Sbjct 2627085 AGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2627026 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 ||| |||| ||||| || ||||| || || || || || ||||| || | ||||| Sbjct 2627025 ATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTC 2626966 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 | | ||||||||| | |||| |||| || |||||||| || || ||||| ||| Sbjct 2626965 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2626906 Query 4961 GGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGT 5015 ||| || ||||| ||||| | | | || ||| || ||| |||| || | | Sbjct 2626905 GGCAGCGAAAAAGGCCAAGATTCTTCCAATGAAAA--ACCTTTCATTGTCA---TTCAAT 2626851 Query 5016 TT---TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC 5072 || | |||| | | | ||||||| |||||||| |||||| ||||||| || || Sbjct 2626850 TTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT 2626791 Query 5073 GCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129 ||||| || || |||||||| |||||| ||| | || ||| |||| |||||| Sbjct 2626790 GCTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049407427321