Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq37 434 2e-116 >seq37 Length=3023111 Score = 434 bits (480), Expect = 2e-116 Identities = 1457/2243 (65%), Gaps = 45/2243 (2%) Strand=Plus/Plus Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427 ||||| | |||||||| || | || || || | || || | | ||||||||||| Sbjct 2501033 TTATCAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCT 2501092 Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487 || |||| || ||||||| || || ||||||||||| | ||| | ||| Sbjct 2501093 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGA 2501152 Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547 || || ||||| || | || || ||| |||||||| || ||||||||| ||| Sbjct 2501153 TCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCC 2501212 Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607 || | |||||| |||||| | |||||||||| ||||||| | | | ||||| || Sbjct 2501213 ATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCG 2501272 Query 75608 TCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664 ||||||| |||| | ||||||||| || | || ||||| || |||| || Sbjct 2501273 TCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATA 2501332 Query 75665 TCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGA 75724 | |||||||| | | | || ||| || | | | | ||||||||||||||| Sbjct 2501333 GCGTCATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTTGA 2501392 Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 75784 || || |||| ||| ||||||| || ||||||||| || ||||| || | | ||||| Sbjct 2501393 AACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTCA 2501452 Query 75785 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTT 75844 ||||| ||||||||||| | || |||||||| ||||| || |||||||| || ||| Sbjct 2501453 TTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTTT 2501512 Query 75845 CTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGT 75904 || | ||| ||| | | || ||||| | | | ||||||||| | || | ||| Sbjct 2501513 CTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTGGC 2501572 Query 75905 ACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTA-GCATATGATCCATTATATGT 75963 | ||| | |||||||| | | || |||| | || ||| || | || || Sbjct 2501573 TTTCTGTTCCACAAGTCGTATTGCAACAAACC-TTGCGATGCTGGTGAGCCTTGGTAAGT 2501631 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC--GCCTCTAACGCACCGTAATAA 76021 ||| || | || || | | |||| ||| || | || || | ||| | | ||| Sbjct 2501632 TTCATAGGGACCTTCTTCCGCCGCTAATTC--AATTGATGCTTCAACAGCAGCATGATAG 2501689 Query 76022 ATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG-GATAATG 76080 |||||||| ||||| | |||| | || ||||| | |||||| ||| | Sbjct 2501690 ATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTC 2501749 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 |||| ||||||||||| || | || || || || | |||| ||||| |||||| | Sbjct 2501750 -AAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCAT 2501808 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 || || | |||||||| |||| ||||| || || ||| || | | |||| | ||| Sbjct 2501809 GTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATT 2501868 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA--AT--TTTCC 76251 | ||| ||||| ||||| | | ||| ||| | ||| || || || Sbjct 2501869 ACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACC 2501928 Query 76252 ATCTATCACAAACATATTAAG---AGCTATAGATGCTAGATTACAAACGGCTACCTCATT 76308 ||| | ||| | | | | ||| || || || | |||||||| || || |||| Sbjct 2501929 ATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATC 2501988 Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368 | | ||||| | || || || | || | | || ||| || | ||| Sbjct 2501989 TGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATT 2502048 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || ||||||| ||| ||||||| | ||||| || | | || || || ||||| || Sbjct 2502049 TTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTC 2502108 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCG 76488 | | |||| || | || || | ||| | | |||||| ||| | ||| || | Sbjct 2502109 AGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTT--TTTCTACCA 2502166 Query 76489 CTTCTCTCTTTCA--TATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 | | |||||| |||| ||| ||| ||||||| || || || |||| || Sbjct 2502167 CGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCC 2502226 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 || ||| |||||| ||| | | ||||| ||| ||||||| || || ||| | |||| Sbjct 2502227 AAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTC 2502286 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 ||||| | ||| || ||||| | ||| || | |||| | |||| |||||| || Sbjct 2502287 ATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTA 2502346 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| ||| || | ||| || | ||||||| ||||||||||| |||||| Sbjct 2502347 CCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATAT 2502406 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 | || | | |||| |||| || ||||| || ||||| | ||| | |||||||| || Sbjct 2502407 AAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTG 2502466 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 |||| | | |||||||||||| || || || ||||| || || |||| || || Sbjct 2502467 AAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCA 2502526 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 ||| | |||||| || ||| | || || || || || |||| || || | Sbjct 2502527 CCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAG 2502586 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGAAG 76965 ||||| || || |||||||| || || || ||| ||| || ||| || | ||| Sbjct 2502587 GCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAG 2502646 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||| || | |||||||| | | ||| || ||||| ||||| ||||| |||| Sbjct 2502647 AAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATG 2502705 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 ||| || || ||| ||| | | |||||| || ||||||||| | ||||| | | Sbjct 2502706 AGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCC 2502765 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 ||| || || | ||| || | ||| | || || || |||| ||| || || ||| Sbjct 2502766 ATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATT 2502825 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAG 77203 || ||||| |||||| | ||||||||||| || ||||| || ||||| ||||| Sbjct 2502826 AATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAA-- 2502883 Query 77204 TCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATG 77263 || | || |||| ||| | || |||| | || || || || ||| | ||| Sbjct 2502884 TCACGGTCATAAACAATTGCTGAGTTTAACTCATCAGCATTTTCTTGAATAATGT-CATA 2502942 Query 77264 ACAGT-GGTAGAAATAATTGGAGATCGT----ATTCCATTTTTAGGATTAACATAGTTAA 77318 | | | ||||| || || | ||| |||| ||| || || | || | Sbjct 2502943 AGTTTCCTTTGAAATCATAGGCG--CGTGAAGATTC--GTTTCTGGGTTGATGTACTCGT 2502998 Query 77319 ATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGG 77378 | ||||||| || | | | | | ||| | |||| || || | || ||||| | Sbjct 2502999 ACAAGTCTTTTGAAACTTGGGAATACAATTTGATGGTTTGTTTATGCAAGTTAGATACCG 2503058 Query 77379 CTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTT 77438 | ||||| ||||||| || |||||||| ||||| || || || || || ||| Sbjct 2503059 CGATTCTTGCAGCTAAAACCGCATAGTCTGGATGAATGGTGGTCATAGTTGCAGCAGTTT 2503118 Query 77439 CTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTT 77498 | || || ||| | ||||| || ||||| ||||| || | |||| || ||| |||| Sbjct 2503119 CAGCAGCCAAATTGTCTAACTCAATAGTTGTAACCCCCTGGTATACACCAGCAATGACTT 2503178 Query 77499 TCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAAT-TTTCTA 77557 | || || | ||| || || | | || || ||||| |||||| ||| || Sbjct 2503179 TTTGGGTAATAGCAACAGGTTCAACGTGATTTGAGTCTAACCCATAGCATAATCTTTGTA 2503238 Query 77558 ATACGAGATGTGATTTTATCAAA 77580 | | || ||||||||| ||||| Sbjct 2503239 CT-CTAGCTGTGATTTTGTCAAA 2503260 Score = 266 bits (294), Expect = 5e-66 Identities = 589/879 (67%), Gaps = 12/879 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||| || | ||| || || ||||| || || || |||| || ||||| Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||||||||| ||||| || ||||| |||| |||||| || || | | Sbjct 2627549 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2627490 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 | ||| || ||||| ||||| | ||| ||||| | |||||||||||| | | Sbjct 2627489 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2627430 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 | || || | || || |||| || |||| |||||| || || || | || || Sbjct 2627429 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2627370 Query 46579 GATGTTAC--TGTTTCC-TCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCA 46635 | || | ||| ||| ||| ||| ||||| ||||| || |||||| Sbjct 2627369 CTTTCAACAATCTTTGGGTCA---GGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2627313 Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695 |||||| || | |||||||| | || ||| ||||| || ||||| || | || ||| Sbjct 2627312 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2627253 Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755 |||| ||| | ||| || | ||| || || | || || |||||| || || || || Sbjct 2627252 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2627193 Query 46756 TCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC---ATTATGAATCCAC 46812 || ||||| || || || || | |||||| | | ||||| || |||||||| Sbjct 2627192 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCCAT 2627133 Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 46872 || |||||||||||||| || || | ||| || ||||| |||||||| || | Sbjct 2627132 CTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAAG 2627073 Query 46873 AAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAA 46932 || | ||| | ||| || | ||| || || || || | ||| |||||||| Sbjct 2627072 AAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGAA 2627013 Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992 ||||||||||| || || || || || ||||| || | ||||||| ||| || || Sbjct 2627012 TGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAACT 2626953 Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052 || | | |||| ||| ||| || ||||| || || |||||| ||||| ||||| Sbjct 2626952 TCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAAG 2626893 Query 47053 GCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTAT---TCCAGTCATTG 47109 ||||| | | ||| ||| | |||||| | | ||| ||| | |||| |||| Sbjct 2626892 GCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATCATGA 2626833 Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169 | |||||| || ||| | |||||| || ||||||||||| || || || || || ||| Sbjct 2626832 AGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTAC 2626773 Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACA 47208 || | ||| || ||| | ||| || ||||| || ||| Sbjct 2626772 ATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934070267840