Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq22 147 5e-30
seq3 123 5e-23
>seq22
Length=92557
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||||||||| ||||||||||| | | || | ||||| ||
Sbjct 76790 ACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 76849
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| ||||| | |||||| || |||||||| || |||||||||
Sbjct 76850 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 76909
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || |||||||| || | ||| || || | ||||| ||||||
Sbjct 76910 ATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTA 76969
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || ||||| || |||||
Sbjct 76970 CCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||||||||| ||||||||||| | | || | ||||| ||
Sbjct 77018 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 77077
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| ||||| | |||||| || |||||||| || |||||||||
Sbjct 77078 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 77137
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| ||| | || |||||||| || | || || || | ||||| ||||||
Sbjct 77138 ATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTA 77197
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| ||||| || || ||||| || ||||||
Sbjct 77198 CCGGTCAATGTTTTGACGAAAATTTGCATT 77227
>seq3
Length=600384
Score = 123 bits (136), Expect = 5e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| || | |||||| || |||||
Sbjct 22004 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 21945
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||| || || || || ||||||||||||||||| | || || |
Sbjct 21944 GATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATT 21885
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | || ||||| | |||||| || |||||||| | || || ||
Sbjct 21884 GTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGAC 21825
Query 283088 GAATATCTGCATT 283100
|| || ||||||
Sbjct 21824 AAAGATTTGCATT 21812
Score = 93.3 bits (102), Expect = 9e-14
Identities = 127/176 (72%), Gaps = 6/176 (3%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||| | ||||| || |||| || ||||||| || || || |||||||||
Sbjct 409104 GGGAAACCTTCAACTTGACCATTGGCAATGGCTCTCATCAAGGTGGATTTACCAGCACCA 409163
Query 317089 TTGGGGCCGCAAAGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || | |||||| | |||| |||| | |||| |||| ||||||
Sbjct 409164 TTTGGACCACACAAACCATATCTTCTGTTTC---TCTTTAATCTAAATTGGGTCTTGTTC 409220
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | ||||| ||||||| |||| ||||||||||| | ||||| ||| || ||
Sbjct 409221 AACAAGATCTTGGCACCATAAGCCAACGAGAACTCACAGTTACACAAGTCTTCACC 409276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738703780198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |