Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq22 87.8 1e-12 >seq3 Length=600384 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| ||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 22039 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21980 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| || || || ||||||||||| | || ||||||| | Sbjct 21979 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 21922 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||||| || ||||| ||| || ||| | |||||||| | || || Sbjct 21921 GGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGATGACTC 21864 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || || || ||||| ||||| || || ||||||||||| Sbjct 21863 AACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 21813 >seq22 Length=92557 Score = 87.8 bits (96), Expect = 1e-12 Identities = 169/244 (69%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| ||| | ||| || ||||| |||||||| Sbjct 76993 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 77052 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| |||| | | || |||| || || || ||||| ||||| | || ||| Sbjct 77053 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 77110 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280 |||| || | |||||| || || ||||| | || | ||| | || ||||| | Sbjct 77111 TCTGGTGGAATACCTTCTTTGTCTTGGATCTT-GGATTTGACGTTGTCAATAGTGTCTGA 77169 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 || || ||||| | || || ||||| || || | || || ||||| |||||||| | Sbjct 77170 TGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT--T 77227 Query 44341 GTGA 44344 |||| Sbjct 77228 GTGA 77231 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||||||||||| ||| | ||| || ||||| |||||||| |||| Sbjct 76772 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 76831 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| || || || ||||| ||||| | || ||||||| | Sbjct 76832 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 76889 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || || ||||| || || ||| | || ||||| | ||||| Sbjct 76890 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTGATGATTC 76947 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || | || || ||||| |||||||| Sbjct 76948 AACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990237666829