Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq37 116 5e-21
seq16 89.7 7e-13
>seq37
Length=3023111
Score = 116 bits (128), Expect = 5e-21
Identities = 214/312 (69%), Gaps = 14/312 (4%)
Strand=Plus/Minus
Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771
||||||||| || ||||||||||| ||||||||| || || || |||||||| |
Sbjct 1390444 TTATCCTGTTTATTATATCAAAGATCGTGTGATATGGGCTTGGGTGTACCTTTCAATATT 1390385
Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831
|| || || || ||| | || | || | ||||| | || |||||| | ||||||
Sbjct 1390384 GCATCATATGCATTACTCACAAAGATGGTTGCTCATGTGGTGGATATGGATTGTGGAGAA 1390325
Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891
||||| ||||| || || || || ||| | || | ||||| | ||||| ||||||||
Sbjct 1390324 TTTATCCATACCTTGGGTGATGCCCATGTATATTTAGATCATATTGATGCATTAAAGGAA 1390265
Query 50892 CAATTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATTTT----AAAGAAAAAATCGAT 50947
||| |||| ||| ||| | || | || | | |||||| || |||
Sbjct 1390264 CAAATGACAAGAATACCAAAACAATTTCCCAAATTGGTGATCAAGGAAGAAAGAAAAGAT 1390205
Query 50948 CGAACTAAGA--------GATTTTAAATTTGAAGATTTCG-AATTGTTGGATTACGATCC 50998
|| ||| | |||||||||||||||||||| | |||||||||| || || ||
Sbjct 1390204 GCAATTAAAACTATTGATGATTTTAAATTTGAAGATTTTGAAATTGTTGGA-TATGAACC 1390146
Query 50999 TCATCCTTCTAT 51010
| ||||||| ||
Sbjct 1390145 TTATCCTTCAAT 1390134
Score = 105 bits (116), Expect = 9e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948
|| |||||||| ||||| |||| || |||| | ||| || | |||||||| || |||
Sbjct 534081 CCTTTTTCATCTGGTAAAGCAATCTCAATCTGAATTTCAAATCTACCAGGTCTCAACAAT 534140
Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008
|| ||||| |||||| |||| ||||||||||| |||| | ||| ||||| ||
Sbjct 534141 GCAGTATCAATCAAGTCGAGTCTATTGGTCATACCAATGACAAGAATATTGTTCAACTGA 534200
Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046
|| ||||| || || || ||||| |||||||| || ||
Sbjct 534201 TCAACACCATCCATCTTTGACAACAATTGATTCACAAC 534238
>seq16
Length=320745
Score = 89.7 bits (98), Expect = 7e-13
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGG 63800
||| |||| |||| ||||| |||||||| ||| ||| | |||||||||||| |||
Sbjct 56817 AAAGTACCTCAAATTGGTGACAAATTTGCATCTAG-ACATGGTCAAAAAGGTACCATTGG 56759
Query 63801 TATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGT 63860
| | | || |||| || ||||||||||| || || ||||| || |||||||| |
Sbjct 56758 TGTTACATACAGACATGAGGATATGCCTTTCACAGCTGAAGGTATTGTCCCCGATCTAAT 56699
Query 63861 CATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896
||| || ||||| ||| |||| |||||||| ||
Sbjct 56698 CATTAACCCACATGCTATTCCATCGCGTATGACAGT 56663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667074891477720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |