Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq37 116 5e-21 seq16 89.7 7e-13 >seq37 Length=3023111 Score = 116 bits (128), Expect = 5e-21 Identities = 214/312 (69%), Gaps = 14/312 (4%) Strand=Plus/Minus Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 ||||||||| || ||||||||||| ||||||||| || || || |||||||| | Sbjct 1390444 TTATCCTGTTTATTATATCAAAGATCGTGTGATATGGGCTTGGGTGTACCTTTCAATATT 1390385 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 || || || || ||| | || | || | ||||| | || |||||| | |||||| Sbjct 1390384 GCATCATATGCATTACTCACAAAGATGGTTGCTCATGTGGTGGATATGGATTGTGGAGAA 1390325 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891 ||||| ||||| || || || || ||| | || | ||||| | ||||| |||||||| Sbjct 1390324 TTTATCCATACCTTGGGTGATGCCCATGTATATTTAGATCATATTGATGCATTAAAGGAA 1390265 Query 50892 CAATTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATTTT----AAAGAAAAAATCGAT 50947 ||| |||| ||| ||| | || | || | | |||||| || ||| Sbjct 1390264 CAAATGACAAGAATACCAAAACAATTTCCCAAATTGGTGATCAAGGAAGAAAGAAAAGAT 1390205 Query 50948 CGAACTAAGA--------GATTTTAAATTTGAAGATTTCG-AATTGTTGGATTACGATCC 50998 || ||| | |||||||||||||||||||| | |||||||||| || || || Sbjct 1390204 GCAATTAAAACTATTGATGATTTTAAATTTGAAGATTTTGAAATTGTTGGA-TATGAACC 1390146 Query 50999 TCATCCTTCTAT 51010 | ||||||| || Sbjct 1390145 TTATCCTTCAAT 1390134 Score = 105 bits (116), Expect = 9e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948 || |||||||| ||||| |||| || |||| | ||| || | |||||||| || ||| Sbjct 534081 CCTTTTTCATCTGGTAAAGCAATCTCAATCTGAATTTCAAATCTACCAGGTCTCAACAAT 534140 Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008 || ||||| |||||| |||| ||||||||||| |||| | ||| ||||| || Sbjct 534141 GCAGTATCAATCAAGTCGAGTCTATTGGTCATACCAATGACAAGAATATTGTTCAACTGA 534200 Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || ||||| || || || ||||| |||||||| || || Sbjct 534201 TCAACACCATCCATCTTTGACAACAATTGATTCACAAC 534238 >seq16 Length=320745 Score = 89.7 bits (98), Expect = 7e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGG 63800 ||| |||| |||| ||||| |||||||| ||| ||| | |||||||||||| ||| Sbjct 56817 AAAGTACCTCAAATTGGTGACAAATTTGCATCTAG-ACATGGTCAAAAAGGTACCATTGG 56759 Query 63801 TATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGT 63860 | | | || |||| || ||||||||||| || || ||||| || |||||||| | Sbjct 56758 TGTTACATACAGACATGAGGATATGCCTTTCACAGCTGAAGGTATTGTCCCCGATCTAAT 56699 Query 63861 CATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 ||| || ||||| ||| |||| |||||||| || Sbjct 56698 CATTAACCCACATGCTATTCCATCGCGTATGACAGT 56663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074891477720