Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq39 181 1e-40
>seq39
Length=2831396
Score = 181 bits (200), Expect = 1e-40
Identities = 566/868 (65%), Gaps = 25/868 (3%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| ||| | |||||| || || || || || || | | || |||||||
Sbjct 2634562 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2634503
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
|||| |||||||| ||||| || | || ||| |||| || |||| | | |
Sbjct 2634502 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTT--TGTTACCCAAAGCAACCAA 2634445
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
|||||| || || |||||||| | |||||| ||||| || | || |||||||| | |
Sbjct 2634444 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2634385
Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| || || | || || || || ||| || || || |||| ||||| |||||||
Sbjct 2634384 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2634325
Query 16912 ACTAGCAAC--TCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
|| |||| || | | || | ||| |||||| | ||| ||||| || |||||
Sbjct 2634324 TCTTTCAACAATCTT---TGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGC 2634268
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
||||| ||||| || || || | | || | ||| || ||||| ||||| || ||
Sbjct 2634267 AAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGG 2634208
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
||| ||||| ||||| ||||| || || | || ||||| ||| || || |||||
Sbjct 2634207 CATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACC 2634148
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
||| || | ||||| || | |||| || || || || || | |||||||
Sbjct 2634147 CTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCCA 2634088
Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208
| | |||| || || || | || || | || ||||| || || || |||||
Sbjct 2634087 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2634028
Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268
|| ||||| | | || | ||||| || || || | || || |||| ||
Sbjct 2634027 GAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGA 2633968
Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328
|| ||||| ||||| || || || || ||||| || |||||| | ||||||||
Sbjct 2633967 ATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAAC 2633908
Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388
||| | | || |||| | | ||||| || || || || || || ||||||||
Sbjct 2633907 TTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAA 2633848
Query 17389 CGCCAATATATGCTT--AATGAAATATTTTTCGTCCGGTGTAA--GAA-----CGCGCCA 17439
|||| | || ||| ||||||| | |||| | ||| | || | | |||
Sbjct 2633847 GGCCA--AGATTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCCA 2633794
Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499
|| | | |||||| || ||| | |||||| | ||||| || || | |||||
Sbjct 2633793 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2633734
Query 17500 TTTATACATATTCCAAATATCATTGTAT 17527
|| ||||| | |||||| |||| ||||
Sbjct 2633733 CTTGTACATTTGCCAAATTTCATGGTAT 2633706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545347696520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |