Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq39 232 7e-56 >seq39 Length=2831396 Score = 232 bits (256), Expect = 7e-56 Identities = 610/922 (66%), Gaps = 27/922 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||||||| ||| | |||||| ||||| || || || || | || || ||||| | Sbjct 2634562 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2634503 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||||||||| ||||| || | || ||| | || | ||||| | | ||| Sbjct 2634502 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGT-TACCCAAA----GCAAC 2634448 Query 16030 ---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086 |||||| || || |||||||| | |||||||||||| || | ||||| ||||| | Sbjct 2634447 CAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAA 2634388 Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146 | | || || | || | || || |||| || ||| || |||| ||||| |||| Sbjct 2634387 CAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAAT 2634328 Query 16147 GATATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACG 16205 || || | | ||| | | ||| |||| | || || ||||| | || | Sbjct 2634327 AAT-TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATG 2634269 Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265 | || || |||| ||||| || | | || | ||| |||||||| || || |||| Sbjct 2634268 CAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTG 2634209 Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325 ||||| ||||| ||||| |||||||| || | |||||| || || || || |||| Sbjct 2634208 GCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATAC 2634149 Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385 ||||||||| |||||||| | |||| || || || ||||| || |||||| Sbjct 2634148 CCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCC 2634089 Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445 || | |||| || || || | ||| || | || ||||| || || || || | Sbjct 2634088 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA 2634029 Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505 | || ||||| ||| | ||||| || ||||||| ||| || |||||| Sbjct 2634028 AGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTG 2633969 Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565 | || ||||| || || || || || ||||| || || || || | ||||| | Sbjct 2633968 AATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAA 2633909 Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625 |||| | |||| |||| ||| ||| ||||| || ||||| ||| ||||| |||| Sbjct 2633908 CTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAA 2633849 Query 16626 ACGCCAATATGTGCTT--AATGAAATATTTTTCGTCAGATGTAA--GAATAT-----GCC 16676 | ||||| | | ||| ||||||| | |||| | ||| | ||| | || Sbjct 2633848 AGGCCAAGA--TTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCC 2633795 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 |||| | | |||||| || ||| | |||||||| ||||| || || | |||| Sbjct 2633794 AATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCT 2633735 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAAGG 16796 | || ||||||| |||||| |||| |||| || ||||| | ||| || | | | | Sbjct 2633734 TCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGT 2633675 Query 16797 ATTCCTTTAACACGGGTTCATC 16818 |||||| || | ||||| || Sbjct 2633674 TTTCCTTCAAAAGTGGTTCTTC 2633653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414150685480