Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq39 232 7e-56
>seq39
Length=2831396
Score = 232 bits (256), Expect = 7e-56
Identities = 610/922 (66%), Gaps = 27/922 (3%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||||||| ||| | |||||| ||||| || || || || | || || ||||| |
Sbjct 2634562 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2634503
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
||||||||||||| ||||| || | || ||| | || | ||||| | | |||
Sbjct 2634502 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGT-TACCCAAA----GCAAC 2634448
Query 16030 ---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086
|||||| || || |||||||| | |||||||||||| || | ||||| ||||| |
Sbjct 2634447 CAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAA 2634388
Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146
| | || || | || | || || |||| || ||| || |||| ||||| ||||
Sbjct 2634387 CAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAAT 2634328
Query 16147 GATATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACG 16205
|| || | | ||| | | ||| |||| | || || ||||| | || |
Sbjct 2634327 AAT-TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATG 2634269
Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265
| || || |||| ||||| || | | || | ||| |||||||| || || ||||
Sbjct 2634268 CAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTG 2634209
Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325
||||| ||||| ||||| |||||||| || | |||||| || || || || ||||
Sbjct 2634208 GCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATAC 2634149
Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385
||||||||| |||||||| | |||| || || || ||||| || ||||||
Sbjct 2634148 CCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCC 2634089
Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
|| | |||| || || || | ||| || | || ||||| || || || || |
Sbjct 2634088 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA 2634029
Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505
| || ||||| ||| | ||||| || ||||||| ||| || ||||||
Sbjct 2634028 AGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTG 2633969
Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565
| || ||||| || || || || || ||||| || || || || | ||||| |
Sbjct 2633968 AATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAA 2633909
Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625
|||| | |||| |||| ||| ||| ||||| || ||||| ||| ||||| ||||
Sbjct 2633908 CTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAA 2633849
Query 16626 ACGCCAATATGTGCTT--AATGAAATATTTTTCGTCAGATGTAA--GAATAT-----GCC 16676
| ||||| | | ||| ||||||| | |||| | ||| | ||| | ||
Sbjct 2633848 AGGCCAAGA--TTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCC 2633795
Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736
|||| | | |||||| || ||| | |||||||| ||||| || || | ||||
Sbjct 2633794 AATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCT 2633735
Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAAGG 16796
| || ||||||| |||||| |||| |||| || ||||| | ||| || | | | |
Sbjct 2633734 TCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGT 2633675
Query 16797 ATTCCTTTAACACGGGTTCATC 16818
|||||| || | ||||| ||
Sbjct 2633674 TTTCCTTCAAAAGTGGTTCTTC 2633653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414150685480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |