Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq39 298 7e-76 >seq39 Length=2831396 Score = 298 bits (330), Expect = 7e-76 Identities = 603/883 (68%), Gaps = 20/883 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||| || | |||||| || ||||| || ||||| | || || ||||| Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 ||||| ||||| |||||||||| ||||| || | | |||| ||||| || | Sbjct 2634503 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2634444 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 ||||| || || ||||| || | |||| ||||| | |||||||||||| | | Sbjct 2634443 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2634384 Query 24024 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083 ||||||| | || |||||| ||||||| |||||| || || || || ||||| Sbjct 2634383 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT- 2634325 Query 24084 GATCTT---ACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 |||| || | | || || ||| || |||||| ||||| ||| ||||| Sbjct 2634324 --TCTTTCAACAATCT-TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGC 2634268 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 ||||| ||||| ||| || || | || ||| ||||| |||||||| || | ||| || Sbjct 2634267 AAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGG 2634208 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||||| || | ||| || | ||| || ||||| ||||| |||||| || || || || Sbjct 2634207 CATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACC 2634148 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC----CGGCGCTGTCATGTATCC 24315 || || || ||||| |||| | ||| || || ||| | || || || |||| Sbjct 2634147 CTCAACAGCAGCAAAAGCAACCAATCTCTCAGCA-AACAATGCATCGGAATCTTGAATCC 2634089 Query 24316 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 24374 | || || |||||||| ||||||||||| | ||| || || || |||||||| || Sbjct 2634088 ATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2634030 Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434 | | | ||| || ||| || | ||| || |||||||| | ||| |||| Sbjct 2634029 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2633970 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 |||||||||||||| || ||||| || || || || || | || || | ||| || Sbjct 2633969 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2633910 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 ||||| | |||| ||| | || |||||||| || || || ||| ||| || ||| Sbjct 2633909 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2633850 Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTAT---TCCAATC 24610 || ||||| | | || ||| | |||| | || || | ||| | ||||||| Sbjct 2633849 AAGGCCAAGATTCTTCCAATGAAAAACCTTTCAT-TGTCATTCAATTTCTCTCTCCAATC 2633791 Query 24611 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 24670 || | ||||||| || ||| | |||||| | ||||| |||||||| || ||||| || Sbjct 2633790 ATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTT 2633731 Query 24671 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713 ||||| | ||| || ||||| ||| ||| ||||| || ||| Sbjct 2633730 GTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688 Score = 297 bits (328), Expect = 2e-75 Identities = 1419/2244 (63%), Gaps = 56/2244 (2%) Strand=Plus/Plus Query 52804 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 ||||| |||| || || | ||| || || | || ||| | | |||||||| || || | Sbjct 2507542 CAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCTGTCT 2507601 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922 ||| || ||||||| ||||| ||||| ||||| | ||| | |||||| Sbjct 2507602 TTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGATCTT 2507661 Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982 || || || || | ||||| ||| |||||||| || | || || | |||||| | Sbjct 2507662 TGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCCATAT 2507721 Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 53042 || || |||||| | |||||||||| |||||| || | | ||| || || |||| Sbjct 2507722 CAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCGTCTG 2507781 Query 53043 GAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 53099 ||| ||||| | ||||| || ||| | | ||||| ||| |||| || | | Sbjct 2507782 GAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATAGCGT 2507841 Query 53100 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 53159 ||||||| | | | || ||| || | | | | |||||||| | |||||| | Sbjct 2507842 CATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTTGAAACT 2507901 Query 53160 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 53219 | |||| ||| ||||| | || ||||||||| || || || || | | | ||||| | Sbjct 2507902 CACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGT 2507961 Query 53220 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 53279 | ||||||||||| | || || ||||| ||||| || |||||||| || ||||| | Sbjct 2507962 TACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCA 2508021 Query 53280 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 53339 ||||| | | | || ||||| | ||||||| ||| | || | || Sbjct 2508022 TACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTGGCTTTC 2508081 Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 53395 ||| | | ||| | | |||| | | ||| || || Sbjct 2508082 TGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTG----AGCCTTGGTAAGTT 2508137 Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455 || || || ||||| | | | |||| |||| || || | ||| | | ||| || Sbjct 2508138 TCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAGATT 2508197 Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAA 53514 ||||| || || | |||| | || ||||| || ||||||| ||| | || Sbjct 2508198 GTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAA 2508257 Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574 | ||||| || || || || ||||| ||||| | | || ||||| |||||| | || Sbjct 2508258 -ACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTT 2508316 Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCT 53634 || | |||||||| |||| || || || || ||| || | | |||| | || | Sbjct 2508317 TGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACG 2508376 Query 53635 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-TTGT-CCATCTAT---T 53689 || |||||| || || | || ||| ||||| |||| ||| || | Sbjct 2508377 TGTAACAACTTTGGTGACGTCATGCAACTTG------TCAAAGTTGTACCAAGCATGCTT 2508430 Query 53690 ACAAACATGTTCAAT-------------GCAATAGATGCCAGATTACAAACGGCTACCTC 53736 || | | || ||||| ||||| || |||| |||||||| || || || Sbjct 2508431 ACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGCAACTTC 2508490 Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796 || | ||| ||||| | || ||| || | || | | || || || || Sbjct 2508491 ATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAA 2508550 Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856 ||||| ||| || ||| ||||||| |||||||| || | |||||||| |||||||| Sbjct 2508551 ATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGT 2508610 Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTA 53916 ||| | || | || | || | | ||| | |||| || ||| | ||| || Sbjct 2508611 CTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTC--TTTCTA 2508668 Query 53917 TCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974 | | |||| | |||||| |||||| |||| ||||| || || || Sbjct 2508669 CCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCA 2508728 Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 54034 |||| ||| ||||| ||| | | ||| | ||| || || | | || |||| | Sbjct 2508729 GCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTT 2508788 Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 54094 |||||||| | ||| || ||||| | |||| || | ||||| | |||| ||| || Sbjct 2508789 TTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCC 2508848 Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154 || || |||||| ||| || | ||| | | ||||||| ||||| ||||| | Sbjct 2508849 TTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGA 2508908 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 |||| | | | | || || | ||||| || || ||||| | || | ||| ||||| Sbjct 2508909 TATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTG 2508968 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274 || |||| | | |||||||||||||||||| || | ||| ||||| || | ||| ||| Sbjct 2508969 TTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAG 2509028 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 ||| ||| |||||| || || | || || || || || |||| || || Sbjct 2509029 GCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATC 2509088 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 || || ||| ||||| || ||||| || || || ||| ||| || |||| || Sbjct 2509089 AAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACC 2509148 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 | ||||| |||||||| | ||| || ||||| || || |||||| | Sbjct 2509149 AAGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCA 2509208 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCAT 54514 || ||||| || ||| ||| | | |||||| ||||| ||| || ||||| | | Sbjct 2509209 TGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTT 2509268 Query 54515 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 54574 ||| || || | || || | ||| | || ||| || ||||||||| | | || Sbjct 2509269 CCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCA 2509328 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 54632 || || | ||| || ||| | ||||||||||| || ||||| || ||||| ||||| Sbjct 2509329 TTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAA 2509388 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 54692 || || || |||| ||| ||||||| | | ||| || ||| || | || || Sbjct 2509389 --TCACGGTCATAAACAATTGCTGAGTTTAACTCATCAGCAT-TTTCTTGAATAATGTCA 2509445 Query 54693 T-GGTAATACTTGAAATAATCGGAG---AATGTTTCCCATTTTTAGGATTGACATAGTTA 54748 | || ||||||| || || | | | ||| ||| || |||| || | Sbjct 2509446 TAAGTTTCCTTTGAAATCATAGGCGCGTGAAGATTC---GTTTCTGGGTTGATGTACTCG 2509502 Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808 | || || || |||| | | | ||| | |||| ||| || | || ||||| Sbjct 2509503 TACAAGTCTTTTGAAACTTGGGAATACAATTTGATGGTTTGTTTATGCAAGTTAGATACC 2509562 Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 54868 || ||||| || |||| || ||||| || ||||| || || ||| || || || Sbjct 2509563 GCGATTCTTGCAGCTAAAACCGCATAGTCTGGATGAATGGTGGTCATAGTTGCAGCAGTT 2509622 Query 54869 TCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 54928 || || | || | |||| || || | ||||| || || | |||| || || || Sbjct 2509623 TCAGCAGCCAAATTGTCTAACTCAATAGTTGTAACCCCCTGGTATACACCAGCAATGACT 2509682 Query 54929 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAAT-TTTCT 54987 || | || || ||| || | |||| | || ||| ||||| |||||| ||| | Sbjct 2509683 TTTTGGGTAATAGCAACAGGTTCAACGTGATTTGAGTCTAACCCATAGCATAATCTTTGT 2509742 Query 54988 AATACGAGATGTGATTTTATCAAA 55011 | | | || ||||||||| ||||| Sbjct 2509743 ACT-CTAGCTGTGATTTTGTCAAA 2509765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721310560720