Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq39 300 1e-76
>seq39
Length=2831396
Score = 300 bits (332), Expect = 1e-76
Identities = 601/884 (68%), Gaps = 15/884 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| |||||| |||||||||||||| || || || | || || |||||
Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060
|||||||||||||| ||||| | ||| | ||| ||| | | ||||| | | |
Sbjct 2634503 TCCATAAAATCAAATGGATTGGTG--ACATT-GTAAACTTTTTTGTTACCCAAAGCAACC 2634447
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
|||||||| || || |||||||| | ||| || ||| || | ||| |||||||| |
Sbjct 2634446 AATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2634387
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
|| |||| || | ||| || || || || | |||||| || | ||| |||||| | ||
Sbjct 2634386 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2634327
Query 16181 ATATCTCTTACTACACTATTTAACGGAGGGTT---TAATAAGTGTTTAAACATTATACAA 16237
|| |||| | ||| | ||| ||| | | ||| || ||||| | ||
Sbjct 2634326 AT---TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCAT 2634270
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||||||| || || ||||| || | || || || || || ||||| || | |||
Sbjct 2634269 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2634210
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||||| ||||| || || | ||| || || | ||||| || ||| || || |||
Sbjct 2634209 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2634150
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
|| ||||| || ||||| |||||||||| |||| | || | || | || |||
Sbjct 2634149 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATC 2634090
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
||| | | ||||||| || || | ||||| ||| | || || ||||| |||
Sbjct 2634089 CATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2634030
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
|| ||| ||| || ||| |||||||| || || | ||| ||| |||||
Sbjct 2634029 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2633970
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597
|||||||| || ||||| || || ||||||||||| || | ||||| | |||||
Sbjct 2633969 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2633910
Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
||||||| |||| |||| | |||||||| ||||| || ||||| || || |||
Sbjct 2633909 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2633850
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTCA 16714
|| || | || | ||| ||| |||| || || | || | | | ||| |||
Sbjct 2633849 AAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATCA 2633790
Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774
|| |||||| |||||| | |||||| ||||||| || || || ||||||| ||
Sbjct 2633789 TGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTG 2633730
Query 16775 TACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818
||||||| ||| || || | ||| ||||||||||| |||||
Sbjct 2633729 TACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATA 2633686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511774525400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |