Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq39 300 1e-76 >seq39 Length=2831396 Score = 300 bits (332), Expect = 1e-76 Identities = 601/884 (68%), Gaps = 15/884 (2%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| |||||| |||||||||||||| || || || | || || ||||| Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060 |||||||||||||| ||||| | ||| | ||| ||| | | ||||| | | | Sbjct 2634503 TCCATAAAATCAAATGGATTGGTG--ACATT-GTAAACTTTTTTGTTACCCAAAGCAACC 2634447 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 |||||||| || || |||||||| | ||| || ||| || | ||| |||||||| | Sbjct 2634446 AATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2634387 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 || |||| || | ||| || || || || | |||||| || | ||| |||||| | || Sbjct 2634386 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2634327 Query 16181 ATATCTCTTACTACACTATTTAACGGAGGGTT---TAATAAGTGTTTAAACATTATACAA 16237 || |||| | ||| | ||| ||| | | ||| || ||||| | || Sbjct 2634326 AT---TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCAT 2634270 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 ||||||||| || || ||||| || | || || || || || ||||| || | ||| Sbjct 2634269 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2634210 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||||| ||||| || || | ||| || || | ||||| || ||| || || ||| Sbjct 2634209 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2634150 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417 || ||||| || ||||| |||||||||| |||| | || | || | || ||| Sbjct 2634149 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATC 2634090 Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477 ||| | | ||||||| || || | ||||| ||| | || || ||||| ||| Sbjct 2634089 CATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2634030 Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537 || ||| ||| || ||| |||||||| || || | ||| ||| ||||| Sbjct 2634029 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2633970 Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597 |||||||| || ||||| || || ||||||||||| || | ||||| | ||||| Sbjct 2633969 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2633910 Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657 ||||||| |||| |||| | |||||||| ||||| || ||||| || || ||| Sbjct 2633909 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2633850 Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTCA 16714 || || | || | ||| ||| |||| || || | || | | | ||| ||| Sbjct 2633849 AAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATCA 2633790 Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774 || |||||| |||||| | |||||| ||||||| || || || ||||||| || Sbjct 2633789 TGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTG 2633730 Query 16775 TACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818 ||||||| ||| || || | ||| ||||||||||| ||||| Sbjct 2633729 TACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATA 2633686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511774525400