Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq39 143 2e-29 >seq39 Length=2831396 Score = 143 bits (158), Expect = 2e-29 Identities = 278/401 (69%), Gaps = 7/401 (2%) Strand=Plus/Minus Query 20045 TTCCC-TTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| || ||||||| ||||| ||||| | || || | | | || | || ||| Sbjct 1392698 TTCCCATTGCTAACTACTAAACGTGTATTCTCCAAGGGGATAATACATGAACTCTTGTGG 1392639 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA-GAAAAAGGAGTTAAGATTTGG-A 20161 |||||| ||||| || || | | | |||| |||||||||||||| || ||| | Sbjct 1392638 TTTATTGCTGGATCCACGGATGCCAAA-ATCTTGAGTGAAAAAGGAGTTAAAATATGGGA 1392580 Query 20162 GCGCACATGGATCTAAGC-AATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGG 20220 | ||| |||| ||| | |||||||| ||| |||||| | | |||| || || Sbjct 1392579 GGGCA-ATGG-TCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCGTCGTGAAGGT 1392522 Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 |||||||| || || ||||| ||||||||||| |||||||| ||||||||| || Sbjct 1392521 GATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATATAAAGATTGC 1392462 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA 20340 | || | ||| ||| ||||| | ||||| || ||| |||| ||||| | ||| Sbjct 1392461 GATACTGACTATACTGGCCAAGGTTTTGATCAGTTGCAAGATGTAATTAAGAAGTTAAAA 1392402 Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 || || ||| | || |||||||| || | | || |||||| | ||| | | || Sbjct 1392401 ACTAATCCATATGATAGAAGAATCATCATGTCAGCTTGGAACCCACCGGATTTCCTGTTG 1392342 Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441 ||||| ||||| ||||||||| | | ||||| ||||| || Sbjct 1392341 ATGGCGTTGCCCCCATGTCATGTCTTTTGCCAGTTTTATGT 1392301 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/214 (69%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 |||| || ||| | | |||||| |||| ||||||||| ||||||| |||||||||| Sbjct 1392220 AATTATCCTGTTTATTATATCAAAGATCGTGTGATATGGGCTTGGGTGTACCTTTCAATA 1392161 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 ||||| ||||| | || || | ||| |||| ||||| ||| | | || | Sbjct 1392160 TTGCATCATATGCATTACTCACAAAGATGGTTGCTCATGTGGTGGATATGGATTGTGGAG 1392101 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632 | || |||| ||| | || || || ||| | || | ||||||| || | ||||| Sbjct 1392100 AATTTATCCATACCTTGGGTGATGCCCATGTATATTTAGATCATATTGATGCATTAAAGG 1392041 Query 20633 TACAGTTAACACGACAACCAAAACAA-TTCCCAA 20665 ||| | ||| || |||||||||| ||||||| Sbjct 1392040 AACAAATGACAAGAATACCAAAACAATTTCCCAA 1392007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183810262855