Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq39 143 2e-29
>seq39
Length=2831396
Score = 143 bits (158), Expect = 2e-29
Identities = 278/401 (69%), Gaps = 7/401 (2%)
Strand=Plus/Minus
Query 20045 TTCCC-TTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103
||||| || ||||||| ||||| ||||| | || || | | | || | || |||
Sbjct 1392698 TTCCCATTGCTAACTACTAAACGTGTATTCTCCAAGGGGATAATACATGAACTCTTGTGG 1392639
Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA-GAAAAAGGAGTTAAGATTTGG-A 20161
|||||| ||||| || || | | | |||| |||||||||||||| || ||| |
Sbjct 1392638 TTTATTGCTGGATCCACGGATGCCAAA-ATCTTGAGTGAAAAAGGAGTTAAAATATGGGA 1392580
Query 20162 GCGCACATGGATCTAAGC-AATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGG 20220
| ||| |||| ||| | |||||||| ||| |||||| | | |||| || ||
Sbjct 1392579 GGGCA-ATGG-TCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCGTCGTGAAGGT 1392522
Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280
|||||||| || || ||||| ||||||||||| |||||||| ||||||||| ||
Sbjct 1392521 GATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATATAAAGATTGC 1392462
Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA 20340
| || | ||| ||| ||||| | ||||| || ||| |||| ||||| | |||
Sbjct 1392461 GATACTGACTATACTGGCCAAGGTTTTGATCAGTTGCAAGATGTAATTAAGAAGTTAAAA 1392402
Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400
|| || ||| | || |||||||| || | | || |||||| | ||| | | ||
Sbjct 1392401 ACTAATCCATATGATAGAAGAATCATCATGTCAGCTTGGAACCCACCGGATTTCCTGTTG 1392342
Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441
||||| ||||| ||||||||| | | ||||| ||||| ||
Sbjct 1392341 ATGGCGTTGCCCCCATGTCATGTCTTTTGCCAGTTTTATGT 1392301
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/214 (69%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512
|||| || ||| | | |||||| |||| ||||||||| ||||||| ||||||||||
Sbjct 1392220 AATTATCCTGTTTATTATATCAAAGATCGTGTGATATGGGCTTGGGTGTACCTTTCAATA 1392161
Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572
||||| ||||| | || || | ||| |||| ||||| ||| | | || |
Sbjct 1392160 TTGCATCATATGCATTACTCACAAAGATGGTTGCTCATGTGGTGGATATGGATTGTGGAG 1392101
Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632
| || |||| ||| | || || || ||| | || | ||||||| || | |||||
Sbjct 1392100 AATTTATCCATACCTTGGGTGATGCCCATGTATATTTAGATCATATTGATGCATTAAAGG 1392041
Query 20633 TACAGTTAACACGACAACCAAAACAA-TTCCCAA 20665
||| | ||| || |||||||||| |||||||
Sbjct 1392040 AACAAATGACAAGAATACCAAAACAATTTCCCAA 1392007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183810262855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |