Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq39 280 1e-70 >seq39 Length=2831396 Score = 280 bits (310), Expect = 1e-70 Identities = 598/879 (68%), Gaps = 23/879 (3%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| |||||||||||||||||| || || ||||| ||| || ||||| Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 |||||||||||||||||||| || ||||| | ||||| | ||| | | | | Sbjct 2634503 TCCATAAAATCAAATGGATTGGT-GACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2634445 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 |||||| || |||| || |||| ||||||| |||| || | ||||||||| || | | Sbjct 2634444 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2634385 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 | || || | | || || || ||||||||||| || || || || | ||||| Sbjct 2634384 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2634325 Query 14152 AATCGTAATAATTTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 14209 | || ||| | || | ||| || || || ||| ||| | || || ||| Sbjct 2634324 TCTTTCAACAATCT--TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2634267 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 |||||| || | || ||||| | || ||| | ||| || ||||| || ||||||||| Sbjct 2634266 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2634207 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 || ||||||| || || ||||| || || | ||| || ||||| || || || ||| Sbjct 2634206 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2634147 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCA 14388 ||||| |||||||| || | |||| || ||||| |||| | | | || ||||| Sbjct 2634146 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2634088 Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | | | ||||| |||| || |||||||| | || |||||||||||||| ||||| Sbjct 2634087 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2634028 Query 14449 ATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 || |||| |||| | | |||| || || || ||||| | ||| ||| |||| Sbjct 2634027 GAAATCGGCTTC-CTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAATAAGTTTC 2633971 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 || || ||||||||||| || || ||||||||||| || | ||||| | ||| Sbjct 2633970 TGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2633911 Query 14566 TACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14625 || || | |||| |||| |||| ||||||||||| ||||||||| || || || Sbjct 2633910 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2633851 Query 14626 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---CTGAGTTT---TTTCCA 14679 ||| ||||| || || ||| || | | ||||||| | | ||| | |||| Sbjct 2633850 AAAGGCCAAGATTCTTCCAATGAAAAA---CCTTTCATTGTCATTCAATTTCTCTCTCCA 2633794 Query 14680 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTT 14739 ||| | ||| ||| | ||| | ||| || | ||||| || || |||| || Sbjct 2633793 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2633734 Query 14740 TTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778 || |||||| ||| ||||| | ||| |||||||| Sbjct 2633733 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAA 2633695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345364856520