Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq15 134 1e-26
seq6 118 8e-22
>seq15
Length=2091020
Score = 134 bits (148), Expect = 1e-26
Identities = 158/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2075489 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075548
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2075549 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075608
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | ||| || | ||||||| | |
Sbjct 2075609 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCT 2075666
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
| |||||||||||||| || ||||||||||||
Sbjct 2075667 TACCGGTCAATGTTTTGACGAAAATTTGCATT 2075698
Score = 127 bits (140), Expect = 2e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2074805 ACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2074864
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2074865 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2074924
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | || || | ||||||| | |
Sbjct 2074925 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCT 2074982
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| |||||||||||||| || |||||||||||
Sbjct 2074983 TACCGGTCAATGTTTTGACGAAAATTTGCAT 2075013
Score = 127 bits (140), Expect = 2e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2075033 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075092
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2075093 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075152
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | || || | ||||||| | |
Sbjct 2075153 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCT 2075210
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| |||||||||||||| || |||||||||||
Sbjct 2075211 TACCGGTCAATGTTTTGACGAAAATTTGCAT 2075241
Score = 127 bits (140), Expect = 2e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2075261 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075320
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2075321 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075380
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | || || | ||||||| | |
Sbjct 2075381 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCT 2075438
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| |||||||||||||| || |||||||||||
Sbjct 2075439 TACCGGTCAATGTTTTGACGAAAATTTGCAT 2075469
>seq6
Length=960076
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 22011 ACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 21952
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | |||||||||||| || | |||||||| ||
Sbjct 21951 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 21892
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | ||| ||| | |||||| ||||
Sbjct 21891 ATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGTTTTA 21832
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| || | ||||| ||||| ||||||||| ||
Sbjct 21831 CCCGTAAGGGTTTTGACAAAGATTTGCATTCTT 21799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343819693055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |