Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq39 178 3e-39
>seq39
Length=2831396
Score = 178 bits (196), Expect = 3e-39
Identities = 312/450 (69%), Gaps = 27/450 (6%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| |||||||| ||||| || ||||| || ||||| | || || ||||||||||||
Sbjct 2634127 GTTGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGG 2634186
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || || | |||| || | |||| |||||||| || |||| | | ||
Sbjct 2634187 TTGAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGAT 2634246
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA--TACCC 102095
|||||| | || || ||||||||| || || |||| | | |||
Sbjct 2634247 GAAGGTTTACACACTGATTTTGCATGCTTGTTG------------TTTGCTCATTTACAA 2634294
Query 102096 CATCAAGA---GA---AAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAAC 102146
||| ||| || || |||| |||| |||| | |||||||| || |||||||
Sbjct 2634295 CAT--AGACCTGACCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAA 2634352
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
||||||| | || | | | |||| |||| || |||||||||| || |||||||||
Sbjct 2634353 AAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGT 2634412
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCAC 102265
| || || |||||||||| || || | | ||||||||| |||| | | |||||
Sbjct 2634413 GTCAATATGTTGAATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAG-TT 2634471
Query 102266 TATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAAC 102325
|| ||||| ||||| || || || ||||| ||||| ||| | | |||||||||
Sbjct 2634472 TACAATGTCACCAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAAT 2634531
Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
|| |||||||| ||||| | || || |||
Sbjct 2634532 TTCTTTGAAAAAAGAGTTTCTGATTACCAA 2634561
Score = 96.9 bits (106), Expect = 7e-15
Identities = 221/330 (67%), Gaps = 2/330 (1%)
Strand=Plus/Minus
Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG-GCCAAGAAGAAGAT 35328
||||||| |||||| || || || || |||||| ||| | || ||| || |
Sbjct 1392650 GAACTCTTGTGGTTTATTGCTGGATCCACGGATGCCAAAATCTTGAGTGAAAAAGGAGTT 1392591
Query 35329 ACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAG 35388
| | || ||| | | ||||| ||| |||||||| |||| | || || | || |
Sbjct 1392590 AAA-ATATGGGAGGGCAATGGTCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCG 1392532
Query 35389 AGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448
|| || ||||||||||| || || || || |||||| | |||||||||||||||||
Sbjct 1392531 TCGTGAAGGTGATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATA 1392472
Query 35449 TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAA 35508
| | || | | || |||||||| | ||| ||||||| ||| || || | ||
Sbjct 1392471 TAAAGATTGCGATACTGACTATACTGGCCAAGGTTTTGATCAGTTGCAAGATGTAATTAA 1392412
Query 35509 GACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568
|| | | | |||||| |||||||||| || || ||| | || ||||| || |||
Sbjct 1392411 GAAGTTAAAAACTAATCCATATGATAGAAGAATCATCATGTCAGCTTGGAACCCACCGGA 1392352
Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCA 35598
| | | | ||||| | || ||||| ||
Sbjct 1392351 TTTCCTGTTGATGGCGTTGCCCCCATGTCA 1392322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583505517245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |