Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq39 178 3e-39 >seq39 Length=2831396 Score = 178 bits (196), Expect = 3e-39 Identities = 312/450 (69%), Gaps = 27/450 (6%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| |||||||| ||||| || ||||| || ||||| | || || |||||||||||| Sbjct 2634127 GTTGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGG 2634186 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || || | |||| || | |||| |||||||| || |||| | | || Sbjct 2634187 TTGAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGAT 2634246 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA--TACCC 102095 |||||| | || || ||||||||| || || |||| | | ||| Sbjct 2634247 GAAGGTTTACACACTGATTTTGCATGCTTGTTG------------TTTGCTCATTTACAA 2634294 Query 102096 CATCAAGA---GA---AAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAAC 102146 ||| ||| || || |||| |||| |||| | |||||||| || ||||||| Sbjct 2634295 CAT--AGACCTGACCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAA 2634352 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 ||||||| | || | | | |||| |||| || |||||||||| || ||||||||| Sbjct 2634353 AAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGT 2634412 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCAC 102265 | || || |||||||||| || || | | ||||||||| |||| | | ||||| Sbjct 2634413 GTCAATATGTTGAATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAG-TT 2634471 Query 102266 TATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAAC 102325 || ||||| ||||| || || || ||||| ||||| ||| | | ||||||||| Sbjct 2634472 TACAATGTCACCAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAAT 2634531 Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 || |||||||| ||||| | || || ||| Sbjct 2634532 TTCTTTGAAAAAAGAGTTTCTGATTACCAA 2634561 Score = 96.9 bits (106), Expect = 7e-15 Identities = 221/330 (67%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG-GCCAAGAAGAAGAT 35328 ||||||| |||||| || || || || |||||| ||| | || ||| || | Sbjct 1392650 GAACTCTTGTGGTTTATTGCTGGATCCACGGATGCCAAAATCTTGAGTGAAAAAGGAGTT 1392591 Query 35329 ACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAG 35388 | | || ||| | | ||||| ||| |||||||| |||| | || || | || | Sbjct 1392590 AAA-ATATGGGAGGGCAATGGTCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCG 1392532 Query 35389 AGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 || || ||||||||||| || || || || |||||| | ||||||||||||||||| Sbjct 1392531 TCGTGAAGGTGATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATA 1392472 Query 35449 TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAA 35508 | | || | | || |||||||| | ||| ||||||| ||| || || | || Sbjct 1392471 TAAAGATTGCGATACTGACTATACTGGCCAAGGTTTTGATCAGTTGCAAGATGTAATTAA 1392412 Query 35509 GACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568 || | | | |||||| |||||||||| || || ||| | || ||||| || ||| Sbjct 1392411 GAAGTTAAAAACTAATCCATATGATAGAAGAATCATCATGTCAGCTTGGAACCCACCGGA 1392352 Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCA 35598 | | | | ||||| | || ||||| || Sbjct 1392351 TTTCCTGTTGATGGCGTTGCCCCCATGTCA 1392322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583505517245