Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq39 304 1e-77
>seq39
Length=2831396
Score = 304 bits (336), Expect = 1e-77
Identities = 603/879 (69%), Gaps = 23/879 (3%)
Strand=Plus/Minus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
||||| || ||| |||||||||||||||||| || || ||||| ||| || |||||
Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504
Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699
|||||||||||||||||||| | ||||| | ||||| | ||| | | | |
Sbjct 2634503 TCCATAAAATCAAATGGATTGGT-GACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2634445
Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759
|||||| || |||| ||| |||| ||||||| |||| || | ||||||||| || | |
Sbjct 2634444 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2634385
Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819
| || || | | || || || ||||||||||| || || || || | |||||
Sbjct 2634384 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2634325
Query 13820 AATTGTAATAATCTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13877
|| || ||||| || | ||| || || || ||| ||| | || || |||
Sbjct 2634324 TCTTTCAACAATCT--TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2634267
Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937
|||||| || | || ||||| | || ||| | ||| || ||||| || |||||||||
Sbjct 2634266 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2634207
Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997
|| ||||||| || || ||||| || || | |||||| || || || || || |||
Sbjct 2634206 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2634147
Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCA 14056
||||| |||||||| || | |||| || ||||| |||| | | | || |||||
Sbjct 2634146 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2634088
Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| | | ||||| |||| || |||||||| | || |||||||||||||| |||||
Sbjct 2634087 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2634028
Query 14117 ATATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173
| || |||| |||| | | |||| || || || ||||| | ||| ||| ||||
Sbjct 2634027 GAAATCGGCTTC-CTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAATAAGTTTC 2633971
Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTG 14233
|| || ||||||||||| || || ||||||||||| || | ||||| | |||
Sbjct 2633970 TGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2633911
Query 14234 TACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293
||||| | |||| |||| |||| ||||||||||| ||||||||| || || ||
Sbjct 2633910 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2633851
Query 14294 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCA 14347
||| ||||| || || ||| || | | ||||||| || | ||| | ||||
Sbjct 2633850 AAAGGCCAAGATTCTTCCAATGAAAAA---CCTTTCATTGTCATTCAATTTCTCTCTCCA 2633794
Query 14348 ATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14407
||| | ||| ||| | ||| | ||| || | ||||| || || |||| ||
Sbjct 2633793 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2633734
Query 14408 TTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14446
|| |||||| ||| ||||| | ||| ||||||||
Sbjct 2633733 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAA 2633695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727766132600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |