Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq39 295 6e-75
>seq39
Length=2831396
Score = 295 bits (326), Expect = 6e-75
Identities = 601/879 (68%), Gaps = 23/879 (3%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
||||| || ||| ||||||||||||||| || || || ||||| ||| || |||||
Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487
||||||||||| |||||||| || ||||| | ||||| | ||| | | | ||
Sbjct 2634503 TCCATAAAATCAAATGGATTGGT-GACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2634445
Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547
|||||| || |||| ||| |||| ||||||| |||| || | ||||||||| || | |
Sbjct 2634444 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2634385
Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607
| || || | | || ||| || ||||||||||| || || || || | |||||
Sbjct 2634384 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2634325
Query 13608 AATCTTAATAATGTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13665
| | || ||| | || | ||| || || || ||| ||| | || || |||
Sbjct 2634324 TCTTTCAACAATCT--TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2634267
Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725
|||||| || | || ||||| | || ||| | ||| || ||||| || |||||||||
Sbjct 2634266 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2634207
Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785
|| ||||||| || || ||||| || || | ||| || ||||| || || || |||
Sbjct 2634206 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2634147
Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCA 13844
||||| |||||||| || | | || || ||||| |||| | | |||| |||||
Sbjct 2634146 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2634088
Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| | | ||||| |||| || |||||||| | || ||||| || |||||||||||
Sbjct 2634087 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2634028
Query 13905 ATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961
|| |||| |||| | | |||| || || || ||||| | ||| ||| ||||
Sbjct 2634027 GAAATCGGCTTC-CTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAATAAGTTTC 2633971
Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021
|| || |||||||| || || || ||||||||||| || | ||||| | |||
Sbjct 2633970 TGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2633911
Query 14022 TACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081
|| || | |||| |||| |||||||||||||||||||||||||| || || ||
Sbjct 2633910 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2633851
Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCA 14135
||| ||||| || || ||| || | | ||||||| || | ||| | ||||
Sbjct 2633850 AAAGGCCAAGATTCTTCCAATGAAAAA---CCTTTCATTGTCATTCAATTTCTCTCTCCA 2633794
Query 14136 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14195
||| | ||| ||| | ||| | ||| || | ||||| || || |||| ||
Sbjct 2633793 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2633734
Query 14196 TTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14234
|| |||||| ||| ||||| | ||| ||||||||
Sbjct 2633733 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAA 2633695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588566687960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |