Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq39 159 8e-34
seq15 154 3e-32
>seq39
Length=2831396
Score = 159 bits (176), Expect = 8e-34
Identities = 546/840 (65%), Gaps = 21/840 (3%)
Strand=Plus/Plus
Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788
||| || ||| |||||||| |||| | || || || ||||||| ||||||| | ||
Sbjct 2633712 TGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGA 2633771
Query 268789 TCTGTCTTATGA-CTTAATAGATTGGAAA----AATTTAAAACCAGAAGAAAGAAGATTT 268843
| | | | || ||| || ||||||| | |||| || || | ||||| ||
Sbjct 2633772 TTTAGGTAAAGATCTTCAT-GATTGGAGAGAGAAATTGAATGACA-ATGAAAGGTTTTTC 2633829
Query 268844 ATATCTTATATTCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGT 268902
|| | | | ||||| | ||||| || | ||||||||| ||||| ||||| | ||
Sbjct 2633830 AT-TGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGT 2633888
Query 268903 AGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGAT 268962
|| || || | | || || || ||||||||||||| || ||||| || ||||| ||
Sbjct 2633889 GGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAAT 2633948
Query 268963 AGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGA 269022
|| ||||| ||||||||||| | || |||| || || |||||||| | ||
Sbjct 2633949 CATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGA 2634008
Query 269023 TAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaa 269082
| || ||| | |||| | |||| ||| || | | ||| ||
Sbjct 2634009 TCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAA 2634068
Query 269083 aTCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGT 269139
|||| ||||| | | |||||| | ||| || || || | || || || ||
Sbjct 2634069 GGCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGT 2634128
Query 269140 TGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTT 269199
||||||||| ||||| || ||||| || || || || ||||| | || || |||||
Sbjct 2634129 TGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2634188
Query 269200 GAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGA 269259
|||||| ||||| | ||||||||||| || || || || |||||||| | | || ||
Sbjct 2634189 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2634248
Query 269260 AGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTC 269319
|||||||||| || || || || || || ||| || ||| | ||| | ||||
Sbjct 2634249 AGGTTTACACACTGATTTTGCATGCTTGTTGTTTGCTCATT---TACAACATAGACCTGA 2634305
Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379
| | | | || | |||||| | ||| ||| | |||| |||||| | ||
Sbjct 2634306 CCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTAC 2634365
Query 269380 GGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAA 269439
|| || | | | | | | || |||||| | || | |||| ||||| || |
Sbjct 2634366 TGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTGA 2634425
Query 269440 GTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTTGA 269496
|| || | || ||||| |||| |||| || || |||||| || || ||
Sbjct 2634426 ATTTGTTGCCGACAGATTATTGGTTGCTTTGGG---TAACAAAAAAGTTTACAATGTCAC 2634482
Query 269497 AAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556
||||| ||| ||||||||||||||| || || | |||||| | |||||||| || ||
Sbjct 2634483 CAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2634542
>seq15
Length=2091020
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2074811 TGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2074870
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2074871 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2074930
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | ||| ||||||| || || |||||||| ||
Sbjct 2074931 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2074990
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| |||||| || || || |||||
Sbjct 2074991 AATGTTTTGACGAAAATTTGCAT 2075013
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2075039 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075098
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2075099 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075158
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | ||| ||||||| || || |||||||| ||
Sbjct 2075159 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075218
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| |||||| || || || |||||
Sbjct 2075219 AATGTTTTGACGAAAATTTGCAT 2075241
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2075267 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075326
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2075327 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075386
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | ||| ||||||| || || |||||||| ||
Sbjct 2075387 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075446
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| |||||| || || || |||||
Sbjct 2075447 AATGTTTTGACGAAAATTTGCAT 2075469
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2075495 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075554
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2075555 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075614
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | || ||||||| || || |||||||| ||
Sbjct 2075615 GATTTGACATTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075674
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| |||||| || || || |||||| ||
Sbjct 2075675 AATGTTTTGACGAAAATTTGCATTGTG 2075701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397824660612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |