Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq39 159 8e-34 seq15 154 3e-32 >seq39 Length=2831396 Score = 159 bits (176), Expect = 8e-34 Identities = 546/840 (65%), Gaps = 21/840 (3%) Strand=Plus/Plus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 ||| || ||| |||||||| |||| | || || || ||||||| ||||||| | || Sbjct 2633712 TGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGA 2633771 Query 268789 TCTGTCTTATGA-CTTAATAGATTGGAAA----AATTTAAAACCAGAAGAAAGAAGATTT 268843 | | | | || ||| || ||||||| | |||| || || | ||||| || Sbjct 2633772 TTTAGGTAAAGATCTTCAT-GATTGGAGAGAGAAATTGAATGACA-ATGAAAGGTTTTTC 2633829 Query 268844 ATATCTTATATTCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGT 268902 || | | | ||||| | ||||| || | ||||||||| ||||| ||||| | || Sbjct 2633830 AT-TGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGT 2633888 Query 268903 AGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGAT 268962 || || || | | || || || ||||||||||||| || ||||| || ||||| || Sbjct 2633889 GGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAAT 2633948 Query 268963 AGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGA 269022 || ||||| ||||||||||| | || |||| || || |||||||| | || Sbjct 2633949 CATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGA 2634008 Query 269023 TAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaa 269082 | || ||| | |||| | |||| ||| || | | ||| || Sbjct 2634009 TCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAA 2634068 Query 269083 aTCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGT 269139 |||| ||||| | | |||||| | ||| || || || | || || || || Sbjct 2634069 GGCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGT 2634128 Query 269140 TGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTT 269199 ||||||||| ||||| || ||||| || || || || ||||| | || || ||||| Sbjct 2634129 TGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2634188 Query 269200 GAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGA 269259 |||||| ||||| | ||||||||||| || || || || |||||||| | | || || Sbjct 2634189 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2634248 Query 269260 AGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTC 269319 |||||||||| || || || || || || ||| || ||| | ||| | |||| Sbjct 2634249 AGGTTTACACACTGATTTTGCATGCTTGTTGTTTGCTCATT---TACAACATAGACCTGA 2634305 Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379 | | | | || | |||||| | ||| ||| | |||| |||||| | || Sbjct 2634306 CCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTAC 2634365 Query 269380 GGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAA 269439 || || | | | | | | || |||||| | || | |||| ||||| || | Sbjct 2634366 TGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTGA 2634425 Query 269440 GTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTTGA 269496 || || | || ||||| |||| |||| || || |||||| || || || Sbjct 2634426 ATTTGTTGCCGACAGATTATTGGTTGCTTTGGG---TAACAAAAAAGTTTACAATGTCAC 2634482 Query 269497 AAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556 ||||| ||| ||||||||||||||| || || | |||||| | |||||||| || || Sbjct 2634483 CAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2634542 >seq15 Length=2091020 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | |||| Sbjct 2074811 TGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2074870 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 2074871 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2074930 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || | ||| ||||||| || || |||||||| || Sbjct 2074931 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2074990 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | |||||| || || || ||||| Sbjct 2074991 AATGTTTTGACGAAAATTTGCAT 2075013 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | |||| Sbjct 2075039 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075098 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 2075099 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075158 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || | ||| ||||||| || || |||||||| || Sbjct 2075159 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075218 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | |||||| || || || ||||| Sbjct 2075219 AATGTTTTGACGAAAATTTGCAT 2075241 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | |||| Sbjct 2075267 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075326 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 2075327 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075386 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || | ||| ||||||| || || |||||||| || Sbjct 2075387 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075446 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | |||||| || || || ||||| Sbjct 2075447 AATGTTTTGACGAAAATTTGCAT 2075469 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | |||| Sbjct 2075495 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075554 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 2075555 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075614 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || | || ||||||| || || |||||||| || Sbjct 2075615 GATTTGACATTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075674 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | |||||| || || || |||||| || Sbjct 2075675 AATGTTTTGACGAAAATTTGCATTGTG 2075701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397824660612