Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq39 260 1e-64
>seq39
Length=2831396
Score = 260 bits (288), Expect = 1e-64
Identities = 635/956 (66%), Gaps = 30/956 (3%)
Strand=Plus/Minus
Query 21123 TTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCttttttt---------GACA 21173
|| |||| ||||| |||| |||| ||| |||| | ||||| ||| | ||
Sbjct 2634634 TTTTTTAGAAATCTTCATCAAATGCAAAATCATTGGCATCTTTATTTTCACTCTTGGCCA 2634575
Query 21174 TAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCA 21233
| | || ||||| |||||| |||||||||||| || ||||| ||||| || |||
Sbjct 2634574 TGACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCA 2634515
Query 21234 ATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATT-TAAA-TATTTTATTACAAC 21290
| || ||| |||||||||||||||||||| | | ||| |||| | |||| ||||
Sbjct 2634514 AGGAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTAC--- 2634458
Query 21291 CCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAAT 21350
||| | |||||||| || || |||||||| | |||||||||||| || | |||||
Sbjct 2634457 CCAAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAAT 2634398
Query 21351 TCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGG 21410
|||| || | ||| | || || | || | || || || |||||| || || |
Sbjct 2634397 TCATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTG 2634338
Query 21411 CTTCAACAATTATATTT---ATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAA 21467
||||| ||| || || | ||| | | || ||| || ||| || ||
Sbjct 2634337 CTTCAGTAATAATTCTTTCAACAATCTTTGG-GTC--AGGTCTATGTTGTAAATGAGCAA 2634281
Query 21468 ACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAA 21527
||| ||| |||||||||||| || ||||||||||| | || || |||||||| ||||
Sbjct 2634280 ACAACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAA 2634221
Query 21528 ATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC--C 21585
| || || || ||||||||||||||||| || ||||| || || || ||||| | || |
Sbjct 2634220 AGGTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCAC 2634161
Query 21586 TGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTC 21645
||||| || || |||||||| |||||||| ||||| |||| ||| | | | ||
Sbjct 2634160 TGAAA--AAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATC 2634103
Query 21646 TTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATC 21705
||| |||||| | ||||| | ||||| | |||||| | || || ||
Sbjct 2634102 GGAATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTC 2634043
Query 21706 AATAGCTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764
|||||| || || |||| || ||| | | ||| | ||
Sbjct 2634042 AATAGCATTGAATAAGA-AATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATA 2633984
Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824
||| |||| ||||| || ||||| ||| || || || || ||||| || | |
Sbjct 2633983 ATGAATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGG 2633924
Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884
| || | | |||||| || | | |||| || ||||||||||||| || || ||||
Sbjct 2633923 CTTCAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCAT 2633864
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944
|| ||| || ||||| ||||| || || || ||| | | ||| || || | ||||
Sbjct 2633863 CAGAGGCAGCGAAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATT 2633804
Query 21945 T---TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAG 22001
| | ||||||| | |||||| |||||| | |||||| | ||||| || |
Sbjct 2633803 TCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATG 2633744
Query 22002 CAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA 22057
| |||||| || ||||| ||| || |||| ||| | || ||||| || |||
Sbjct 2633743 CTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900540698360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |