Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq39 322 6e-83 >seq39 Length=2831396 Score = 322 bits (356), Expect = 6e-83 Identities = 1206/1884 (64%), Gaps = 38/1884 (2%) Strand=Plus/Plus Query 61991 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 ||||| |||| || || | ||| || || | || ||| | | |||||||| || || | Sbjct 2507542 CAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCTGTCT 2507601 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109 ||| || ||||||| ||||| ||||| || || | ||| | |||||| Sbjct 2507602 TTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGATCTT 2507661 Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169 || || || || | ||||| ||| |||||||| || | || || | |||||| | Sbjct 2507662 TGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCCATAT 2507721 Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 62229 || || |||||| | |||||||||| |||||| || | | ||| || || |||| Sbjct 2507722 CAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCGTCTG 2507781 Query 62230 GAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62286 ||| ||||| | |||||||| ||| | || ||||| ||| |||| || | | Sbjct 2507782 GAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATAGCGT 2507841 Query 62287 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62346 ||||||| | | | || ||| || | | | | |||||||| | |||||| | Sbjct 2507842 CATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTTGAAACT 2507901 Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406 | |||| ||| ||||| | || ||||||||| || || || || | | ||||| | Sbjct 2507902 CACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGT 2507961 Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466 | ||||||||||| | || || ||||| ||||| || |||||||| || ||||| | Sbjct 2507962 TACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCA 2508021 Query 62467 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 ||||| | | | || ||||| | ||||||| ||| | || | || Sbjct 2508022 TACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTGGCTTTC 2508081 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 62582 ||| | | ||| | | |||| | | ||| || || Sbjct 2508082 TGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTG----AGCCTTGGTAAGTT 2508137 Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642 || || || ||||| | | | |||| |||| || || | ||| | | ||| || Sbjct 2508138 TCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAGATT 2508197 Query 62643 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAA 62701 ||||| || || | |||| | || ||||| || ||||||| ||| | || Sbjct 2508198 GTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAA 2508257 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 | ||||| || || || || ||||| ||||| | | || ||||| |||||| | || Sbjct 2508258 -ACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTT 2508316 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62821 || | |||||||| |||| || || || || ||| || | | |||| | ||| | Sbjct 2508317 TGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACG 2508376 Query 62822 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATC--GC---CCATC 62872 || |||||| || || | || ||| ||| | | || | || ||||| Sbjct 2508377 TGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATC 2508436 Query 62873 T-----ATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62927 | || || | || || |||| || |||| |||||||| || || |||| Sbjct 2508437 CTGCTCAATAAAAGAAGGT--AAAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATCT 2508494 Query 62928 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 62987 | ||| ||||| | || ||| || | || | | || ||| || |||||| Sbjct 2508495 GGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTT 2508554 Query 62988 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63047 | ||| || ||| ||||||| |||||||| || | |||||||| |||||||| ||| Sbjct 2508555 TTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCA 2508614 Query 63048 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 63107 | || | || | || | | ||| | | |||| || ||| | ||| || | | Sbjct 2508615 GTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTC--TTTCTACCAC 2508672 Query 63108 --CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 | |||| | |||||| |||||| | || ||||| || || || ||| Sbjct 2508673 GACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCA 2508732 Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225 | ||| ||||| ||| | | ||| | ||| || || | | || |||| ||||| Sbjct 2508733 AGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCA 2508792 Query 63226 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63285 |||| | ||| || ||||| | |||| || | ||||| | |||| ||| || || | Sbjct 2508793 TAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTAC 2508852 Query 63286 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63345 | |||||| ||| || | ||| | | ||||||| ||||| ||||| | |||| Sbjct 2508853 CATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATA 2508912 Query 63346 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63405 || | | | || || | ||||| || || ||||| | || | ||| ||||| || Sbjct 2508913 AAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGA 2508972 Query 63406 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTC 63465 |||| | | ||||||||||||||| ||||| |||| |||||||| | ||| ||| | Sbjct 2508973 AAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCAC 2509032 Query 63466 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 || ||| |||||| || || | || || || || || |||| || || || | Sbjct 2509033 CAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGG 2509092 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | ||| ||||| |||||||| ||||| || || ||| || |||| || | | Sbjct 2509093 CACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGA 2509152 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 |||| |||||||| | ||| || ||||| || || |||||| | || | Sbjct 2509153 AACAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAG 2509212 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63705 |||| || ||| ||| | | |||||| ||||||||| || ||||| | | || Sbjct 2509213 TAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCAT 2509272 Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63765 | || || | || || | ||| | || ||| || ||||||||| | | || || | Sbjct 2509273 GGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAA 2509332 Query 63766 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 63823 | ||||| || ||| | ||||||||||| || ||||| || ||||| ||||| || Sbjct 2509333 TACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAA--TC 2509390 Query 63824 TCGTTCGTAAATAATAACCGAGTT 63847 || || |||| ||| | ||||| Sbjct 2509391 ACGGTCATAAACAATTGCTGAGTT 2509414 Score = 320 bits (354), Expect = 2e-82 Identities = 605/880 (69%), Gaps = 14/880 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||| || | |||||| || ||||| || || || |||| || ||||| Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| |||||||| |||||||| ||||| |||| |||||| ||||| || | Sbjct 2634503 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2634444 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 ||||| || || || ||||| | |||| ||||| | |||||||||||| | | Sbjct 2634443 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2634384 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 ||||||| | || |||||| ||||||| |||||| || || || || ||||| Sbjct 2634383 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2634324 Query 33253 GATCTAACGGTTTCTTCACTC-GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | ||| | | || || ||| ||| |||||| ||||| ||| ||||| || Sbjct 2634323 CTTTCAACAATCT-TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCAAA 2634265 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 ||| ||| | ||| || || | || ||| | ||| |||||||| || | ||| ||||| Sbjct 2634264 ATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGCAT 2634205 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || || | ||| || | ||| || |||||||| || |||||| || ||||| || || Sbjct 2634204 TAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCCTC 2634145 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCGCTGTCATGTATCCA-C 33486 || |||||||| |||| | |||||| || ||| | || || || ||||| | Sbjct 2634144 AACAGCAGCAAAAGCAACCAATCTCTCAGCA-AACAATGCATCGGAATCTTGAATCCATC 2634086 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || |||||||| ||||||||||| | ||| || ||||| || ||||| || | Sbjct 2634085 TGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAAG 2634027 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 | | ||| || ||| || | |||||| || ||||| | ||| |||| ||| Sbjct 2634026 AAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGAA 2633967 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 ||||||||||| || || || || || || || || | || || | ||| || ||| Sbjct 2633966 TGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAACT 2633907 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | |||| |||| |||| |||||||| || || || ||| ||| || ||||| Sbjct 2633906 TCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAAG 2633847 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTAT---TCCAATCATT 33782 ||||| | | || ||| | |||| | || || | ||| | ||||||||| Sbjct 2633846 GCCAAGATTCTTCCAATGAAAAACCTTTCAT-TGTCATTCAATTTCTCTCTCCAATCATG 2633788 Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 | ||||||| || ||| | |||||| | ||||| |||||||| || ||||| || || Sbjct 2633787 AAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTA 2633728 Query 33843 CATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 ||| | ||| || |||| ||| || || || || ||| Sbjct 2633727 CATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688 Score = 89.7 bits (98), Expect = 6e-13 Identities = 412/640 (64%), Gaps = 18/640 (3%) Strand=Plus/Minus Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAG 63237 |||| ||| | | ||| ||||| || ||| | ||| |||| || |||||| | ||||| Sbjct 922203 CATCGGGAGAAAACAAAGACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAG 922144 Query 63238 GAATCCAAAGAGCTAT-AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296 ||||||| | | | || ||| | ||| || || | | || ||||| || ||||||| Sbjct 922143 GAATCCACA-ACCCATAAAACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTT 922085 Query 63297 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63356 | | | | | | | | | ||| | |||||| || |||||||| || || | | || Sbjct 922084 CTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCT 922025 Query 63357 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63416 || || | |||| ||| || || || | |||| || ||||| || | |||| ||| Sbjct 922024 CCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAAC 921965 Query 63417 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGA 63476 || |||| | || || | | |||||||| | || |||| || ||| | | Sbjct 921964 ATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTA 921905 Query 63477 ATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG-CGCATCGTT 63534 ||||| ||| ||| | || || || || | |||||| ||||| | ||| || | Sbjct 921904 ATATTGTGAATATGA-ATTCCAATACCGCCAGAAGCTTTAGAAATTAACGCCGCTTC-AT 921847 Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTA 63593 | ||| | |||||| || || || |||||| ||| || ||| | ||| ||| Sbjct 921846 GAAGCGTTTGATAGATCCCATCAATTGAATCATCCTTCATTGCTAA-CAAAAAGCAGGAT 921788 Query 63594 GACATTTGGT--GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651 || | | || ||| | ||| |||||| ||| || || || || | || Sbjct 921787 GAAAGGTAGTTGTACGCGCA--TCCGGCATTATATAGTGTTGGCAGTGCATGGATGAAGT 921730 Query 63652 ATTTTTCAGAAAGTAGATTGTACGT---CTCAATAGCTGAGTCTATATCCCATTGATGAA 63708 |||||| || | ||| ||| || ||||| ||| | ||| || ||| |||| Sbjct 921729 ATTTTTGGGACATTAGTACGTATGTTTCCTCAACCGCT---TGTATGTCATCTTGGTGAA 921673 Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768 || ||| || || | | ||||||| | || ||||| | || |||||| || Sbjct 921672 TTTCTATAGCCACTCTGAGAAACATGTATTCTGGAGTTTCAGCTATTTTGTTGCCAGTTC 921613 Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63808 || | | || || ||||||||||| || | |||||||| Sbjct 921612 TCCAAAGATATGAGTTTTCCAAAGTCTTGATTCCAAAATA 921573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946896313240