Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq39 136 1e-26 >seq39 Length=2831396 Score = 136 bits (150), Expect = 1e-26 Identities = 482/744 (65%), Gaps = 22/744 (3%) Strand=Plus/Plus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || || || ||| || | || ||||| ||| ||| || | ||| || ||| | || Sbjct 2633845 GCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCTGCT 2633904 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| || || |||| || || |||||| | ||||| ||||| ||||| || Sbjct 2633905 GAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATGATGGAAAACATT 2633964 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAACAAC 22396 || | ||||| ||||| | || | | ||| || | ||| | | ||| | Sbjct 2633965 CATTCAGAAACTTATTCATTATTGATTGAA--ACTTATATCAAGGATCCAAAGGAAGC-C 2634021 Query 22397 GAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCG 22455 || ||||||| || ||| ||||| | |||||| || ||||| |||||||| Sbjct 2634022 GATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAGGCTGATTGGGCC 2634081 Query 22456 CTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCTGTG 22512 | | |||||| | || | |||| || || | | |||| ||||||| Sbjct 2634082 ATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCT 2634141 Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCA 22572 ||||| || || || || |||| | ||| | | || || ||| | || || | | | Sbjct 2634142 GTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGA 2634201 Query 22573 ATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACC 22632 | ||||| || | || ||||| ||||| || ||| | || ||||| ||| | || || Sbjct 2634202 TTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGAAGGTTTACACACT 2634261 Query 22633 GATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT--CCATATGAAACTG 22690 |||||||| || || | | | |||| | |||| || | || | || || Sbjct 2634262 GATTTTGCATGCTTGTTGTTTGC---TCATTTACAACATAGACCTGACCCAAAGAT--TG 2634316 Query 22691 TACTTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGT 22747 | ||| | ||||||| | ||||||||| ||||| ||| || || || | Sbjct 2634317 T---TGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTACTGATGCAT 2634373 Query 22748 TACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTG 22807 | ||||| ||| | | || || ||| | | ||| || |||| || ||||||||| Sbjct 2634374 TGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTGAATTTGTTG 2634433 Query 22808 CAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTG 22867 | || | |||| || | | ||| | ||| ||| || ||| |||||||||| Sbjct 2634434 CCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAGTTTACAATGTCACCAATCCATTTG 2634493 Query 22868 AATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTG 22927 | | ||||| ||| || | | || |||||||||||||| |||||||||||| || Sbjct 2634494 ATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAAAGAGTTTCTG 2634553 Query 22928 AATACCAAAAAGCAGGTGTTATGG 22951 | |||||||| || ||||| |||| Sbjct 2634554 ATTACCAAAAGGCTGGTGTCATGG 2634577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352948730498