Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq15 152 4e-32
>seq15
Length=2091020
Score = 152 bits (168), Expect = 4e-32
Identities = 174/232 (75%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| || || || || ||||||||||| ||||||| | || || |||||
Sbjct 2075700 ACAATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCA 2075641
Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|| |||||||| || || || || || ||| ||||||||||| |||||||| |
Sbjct 2075640 TCAGACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAG 2075583
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
| ||||| | | |||||||| || |||||||| ||||||| | | ||| || ||| |
Sbjct 2075582 ATCAACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACT 2075523
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||| ||||||||||||||||| | || || ||| | || | ||||| ||
Sbjct 2075522 ACAACATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075471
Score = 147 bits (162), Expect = 2e-30
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||||||||| ||||||| | || || || || ||
Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || || || ||| ||||||||||| |||||||| || |
Sbjct 2074953 GACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATC 2074896
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | |||||||| || |||||||| ||||||| | | ||| || ||| ||||
Sbjct 2074895 AACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACA 2074836
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||||||||||||||| |||| || ||| | || | ||||| ||
Sbjct 2074835 ACATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 2074787
Score = 141 bits (156), Expect = 8e-29
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||||||||| ||||||| | || || || || ||
Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || || || ||| ||||||||||| |||||||| || |
Sbjct 2075181 GACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATC 2075124
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | |||||||| || |||||||| ||||||| | | ||| || ||| ||||
Sbjct 2075123 AACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACA 2075064
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||||||||||||||| | || || ||| | || | ||||| ||
Sbjct 2075063 ACATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075015
Score = 141 bits (156), Expect = 8e-29
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||||||||| ||||||| | || || || || ||
Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || || || ||| ||||||||||| |||||||| || |
Sbjct 2075409 GACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATC 2075352
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | |||||||| || |||||||| ||||||| | | ||| || ||| ||||
Sbjct 2075351 AACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACA 2075292
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||||||||||||||| | || || ||| | || | ||||| ||
Sbjct 2075291 ACATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327794033785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |