Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq15 156 4e-33
seq6 132 4e-26
seq39 87.8 2e-12
>seq15
Length=2091020
Score = 156 bits (172), Expect = 4e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || |||||||| || |||| | || || ||| | |
Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2074953 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2074894
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2074893 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2074834
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
||||||||||||||||| |||| || || ||| ||||| | || ||||||
Sbjct 2074833 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGGTTTT 2074783
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || |||||||| || |||| | || || ||| | |
Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2075181 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075122
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2075121 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075062
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| | || || || ||| ||||| | || |||
Sbjct 2075061 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075014
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || |||||||| || |||| | || || ||| | |
Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2075409 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075350
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2075349 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075290
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| | || || || ||| ||||| | || |||
Sbjct 2075289 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075242
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || |||||||| || |||| | || || || | |
Sbjct 2075697 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATCA 2075638
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2075637 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075578
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2075577 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075518
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| | || || || ||| ||||| | || |||
Sbjct 2075517 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075470
>seq6
Length=960076
Score = 132 bits (146), Expect = 4e-26
Identities = 171/235 (73%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGA-TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271
||||||| ||||||| ||||| ||||| | || |||||||| ||||| | ||||| ||
Sbjct 21796 GTAAAGAATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGA 21855
Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
| | || ||| | ||| || |||| || || ||||||||||| || || |||||
Sbjct 21856 GTCATCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACC 21915
Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391
||||||||| | | || ||||| || ||||| || || ||| | || | |||||
Sbjct 21916 AGATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGA 21975
Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 21976 CTACAACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 22030
>seq39
Length=2831396
Score = 87.8 bits (96), Expect = 2e-12
Identities = 162/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 129117 CAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTT 129176
||||||| || | | |||||| ||||| ||||| || | | | |||||| ||
Sbjct 2507876 CAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGA 2507935
Query 129177 GGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236
||| | ||||| || |||||||||| || || ||||| | || | || || |||||
Sbjct 2507936 AGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCAT 2507995
Query 129237 GTAAGCCACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGT 129296
|||||| | | ||||||| || |||||| | || | || ||| ||||
Sbjct 2507996 TGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATC 2508055
Query 129297 CCAGTCCCACA-TCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACC 129350
||| ||||||| | | ||| | | || |||||||||||||||||||| | |||
Sbjct 2508056 CCAATCCCACAATTCAGTTGGCTTTCTG-TTCCACAAGTCGTATTGCAACAAACC 2508109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727800498035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |