Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq15 136 3e-27 seq6 125 5e-24 >seq15 Length=2091020 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | || || |||||||| |||||||| ||| Sbjct 2074787 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2074846 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| |||||||| ||||| | ||||| | ||||| || |||| Sbjct 2074847 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2074906 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || ||| ||| ||| | || ||||| || ||| || Sbjct 2074907 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2074966 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||||| ||||| ||||| |||| ||||| || |||||||||||| Sbjct 2074967 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075014 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | || || |||||||| |||||||| ||| Sbjct 2075015 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075074 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| |||||||| ||||| | ||||| | ||||| || |||| Sbjct 2075075 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075134 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || ||| ||| ||| | || ||||| || ||| || Sbjct 2075135 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075194 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||||| ||||| ||||| |||| ||||| || |||||||||||| Sbjct 2075195 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075242 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | || || |||||||| |||||||| ||| Sbjct 2075243 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075302 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| |||||||| ||||| | ||||| | ||||| || |||| Sbjct 2075303 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075362 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || ||| ||| ||| | || ||||| || ||| || Sbjct 2075363 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075422 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||||| ||||| ||||| |||| ||||| || |||||||||||| Sbjct 2075423 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075470 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | || || |||||||| |||||||| ||| Sbjct 2075471 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075530 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| |||||||| ||||| | ||||| | ||||| || |||| Sbjct 2075531 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075590 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || ||| ||| ||| | || ||||| || || || Sbjct 2075591 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGACTCAACC 2075650 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||||| ||||| ||||| |||| ||||| || ||||||||||| Sbjct 2075651 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075697 >seq6 Length=960076 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | ||||| || ||||| |||||||| ||| Sbjct 22029 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21970 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| |||||||| ||||| | ||||| | ||||| || ||| Sbjct 21969 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGG 21910 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || ||| || ||| | || || || || || || Sbjct 21909 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACT 21850 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||||||||| || || ||||| ||||| |||||||| Sbjct 21849 TCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 21803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391830127115