Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq39 93.3 7e-14
>seq39
Length=2831396
Score = 93.3 bits (102), Expect = 7e-14
Identities = 131/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 203882 CTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGAC 203941
|||| |||||||| || ||||||| || |||| ||| || || | ||||||| | |
Sbjct 2507580 CTCAAGTAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTC 2507639
Query 203942 AGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAA 204001
| ||| | || | | || || ||||||||||| | || || ||||||||||||
Sbjct 2507640 AATTTACCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAAT 2507699
Query 204002 GGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
| || | ||| | ||||||| |||||| ||| ||||| || ||||| || || |||
Sbjct 2507700 GCAGCTCTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTG 2507759
Query 204062 AACA 204065
|||
Sbjct 2507760 TACA 2507763
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGA 159972
||||| | ||| ||||| || ||| | || || || ||| | || || || |||||
Sbjct 2634282 AAACAACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGA 2634223
Query 159973 CATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACC 160032
| | | | || ||||| | || | | || | ||| ||||||| ||||| | ||
Sbjct 2634222 AAAGGTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCC 2634163
Query 160033 GCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTT 160092
|| |||||||| ||||| || || ||||| || || | |||||| |||| | || |
Sbjct 2634162 ACTGAAAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATC 2634103
Query 160093 GGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTT 160132
|| || || |||| || ||||||| ||||||||||||
Sbjct 2634102 GGAATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTT 2634063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154812361840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |