Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq39 181 1e-40
seq14 113 5e-20
>seq39
Length=2831396
Score = 181 bits (200), Expect = 1e-40
Identities = 551/842 (65%), Gaps = 21/842 (2%)
Strand=Plus/Plus
Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391
||||| | |||||| ||||||||||||| ||||| |||||||| || || || ||
Sbjct 2508504 TATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTG 2508563
Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451
|| |||| ||| || |||||||| || | |||| ||||||||||||| || || |||| |
Sbjct 2508564 GACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCC 2508623
Query 110452 TTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511
| | |||| | ||| | | || || || || | ||||||| | |
Sbjct 2508624 TCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTC 2508683
Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA-AAGACCCTTCGC 110570
||||| || ||||| || ||||||| | || || ||||| ||| || |
Sbjct 2508684 TCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCAAGT---TTGGA 2508740
Query 110571 -CTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628
||| | ||| |||| | | ||||| ||| | |||||| || ||||| ||||
Sbjct 2508741 GCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAA 2508800
Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688
|| || ||||||| || | ||| | ||| | | | ||||| | ||| |||||
Sbjct 2508801 TCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTC 2508860
Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-- 110746
| | || | ||||| | |||||| | |||||||||||| ||||| | ||| |
Sbjct 2508861 TTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAA 2508920
Query 110747 -----TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801
||| || ||| || ||| || | ||||| || || ||| ||||| ||
Sbjct 2508921 GCACCTGG-TCTCTTGTTACCACCT---TGATCCACATAACGAGCAGTGTTGTTGAAAAC 2508976
Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861
| | ||| |||||||| |||| || ||| || ||||| || || | |
Sbjct 2508977 ACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGT 2509036
Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921
|| |||||||| ||||||||||| ||||||||||| || | || ||| |||||
Sbjct 2509037 GGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACA 2509096
Query 110922 -CTCTGT-GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979
||| | ||||| |||||||||| ||||| |||||| | || | |||| | ||
Sbjct 2509097 TGTCTTTAAAGTGT--CATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAA 2509154
Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039
||||| ||||| || || || || || |||||||| | || | ||||| |
Sbjct 2509155 CAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTA 2509214
Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099
|| | ||| |||||| ||||| || || | | || | |||| | || ||
Sbjct 2509215 AAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGG 2509274
Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACA 111159
|||||||| ||||||| ||| | || | ||| || |||| | ||||||| || |
Sbjct 2509275 ATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATA 2509334
Query 111160 CG 111161
||
Sbjct 2509335 CG 2509336
>seq14
Length=365783
Score = 113 bits (124), Expect = 5e-20
Identities = 130/173 (75%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 158479 TATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTA--TCAACGTTGGTG 158536
||||| |||||||||||||||||||| | ||||| || || ||| ||||| |||||
Sbjct 51547 TATGGTCGTGTGGCACCTCGTTCGGGGCTTGCTGTCAAACATGGTATTTCAAC--TGGTG 51490
Query 158537 CGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAG 158596
| || ||||| || |||||||| || ||||| ||||| || | ||||| ||| |
Sbjct 51489 CAGGTGTCATTGACGCTGATTATCGAGGTGAAGTTAAAGTTGTCTTGTTCAACCATTCTG 51430
Query 158597 ACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAA 158649
| ||| ||||||| ||||| ||||| ||| | || || || | ||| |||||
Sbjct 51429 AAAAGAACTTTGATGTTAAAAAGGGCGATAGAATTGCTCAATTGGTTTTAGAA 51377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975712874200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |