Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq39 181 1e-40 seq14 113 5e-20 >seq39 Length=2831396 Score = 181 bits (200), Expect = 1e-40 Identities = 551/842 (65%), Gaps = 21/842 (2%) Strand=Plus/Plus Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391 ||||| | |||||| ||||||||||||| ||||| |||||||| || || || || Sbjct 2508504 TATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTG 2508563 Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451 || |||| ||| || |||||||| || | |||| ||||||||||||| || || |||| | Sbjct 2508564 GACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCC 2508623 Query 110452 TTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511 | | |||| | ||| | | || || || || | ||||||| | | Sbjct 2508624 TCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTC 2508683 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA-AAGACCCTTCGC 110570 ||||| || ||||| || ||||||| | || || ||||| ||| || | Sbjct 2508684 TCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCAAGT---TTGGA 2508740 Query 110571 -CTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 ||| | ||| |||| | | ||||| ||| | |||||| || ||||| |||| Sbjct 2508741 GCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAA 2508800 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688 || || ||||||| || | ||| | ||| | | | ||||| | ||| ||||| Sbjct 2508801 TCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTC 2508860 Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-- 110746 | | || | ||||| | |||||| | |||||||||||| ||||| | ||| | Sbjct 2508861 TTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAA 2508920 Query 110747 -----TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801 ||| || ||| || ||| || | ||||| || || ||| ||||| || Sbjct 2508921 GCACCTGG-TCTCTTGTTACCACCT---TGATCCACATAACGAGCAGTGTTGTTGAAAAC 2508976 Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861 | | ||| |||||||| |||| || ||| || ||||| || || | | Sbjct 2508977 ACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGT 2509036 Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921 || |||||||| ||||||||||| ||||||||||| || | || ||| ||||| Sbjct 2509037 GGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACA 2509096 Query 110922 -CTCTGT-GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979 ||| | ||||| |||||||||| ||||| |||||| | || | |||| | || Sbjct 2509097 TGTCTTTAAAGTGT--CATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAA 2509154 Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039 ||||| ||||| || || || || || |||||||| | || | ||||| | Sbjct 2509155 CAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTA 2509214 Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 || | ||| |||||| ||||| || || | | || | |||| | || || Sbjct 2509215 AAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGG 2509274 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACA 111159 |||||||| ||||||| ||| | || | ||| || |||| | ||||||| || | Sbjct 2509275 ATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATA 2509334 Query 111160 CG 111161 || Sbjct 2509335 CG 2509336 >seq14 Length=365783 Score = 113 bits (124), Expect = 5e-20 Identities = 130/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 158479 TATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTA--TCAACGTTGGTG 158536 ||||| |||||||||||||||||||| | ||||| || || ||| ||||| ||||| Sbjct 51547 TATGGTCGTGTGGCACCTCGTTCGGGGCTTGCTGTCAAACATGGTATTTCAAC--TGGTG 51490 Query 158537 CGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAG 158596 | || ||||| || |||||||| || ||||| ||||| || | ||||| ||| | Sbjct 51489 CAGGTGTCATTGACGCTGATTATCGAGGTGAAGTTAAAGTTGTCTTGTTCAACCATTCTG 51430 Query 158597 ACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAA 158649 | ||| ||||||| ||||| ||||| ||| | || || || | ||| ||||| Sbjct 51429 AAAAGAACTTTGATGTTAAAAAGGGCGATAGAATTGCTCAATTGGTTTTAGAA 51377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975712874200