Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq39 215 6e-51 seq14 107 2e-18 >seq39 Length=2831396 Score = 215 bits (238), Expect = 6e-51 Identities = 929/1451 (64%), Gaps = 51/1451 (4%) Strand=Plus/Plus Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGG 105954 || ||||| |||||| || || | |||||| ||| || || || | ||||| || Sbjct 2507886 TTAACAATTTGAAACTCACCAGCCAACACTCTTCT-AGAGTAAATATTTGAAGTGTATGG 2507944 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || || |||||||| |||||||| ||||||| || || || || |||||||| |||| Sbjct 2507945 CTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCAC 2508004 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTG-ATGCGTTCCTTGAGAA-CATCCCAGTCG 106072 ||| | ||| | | ||| | || | | | || || ||| | ||||||| || Sbjct 2508005 CAACAAGGAGTTTCTCATACCGTGTT--TGGCAAGCTTTTCTTTCAATTCATCCCAATCC 2508062 Query 106073 TAG--TTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | || || | | |||| | ||||| || |||| | || ||||| || | | Sbjct 2508063 CACAATTCAGTTGGCTTTCTGTT--CCACAAGTCGTATTGCAACAAACCTTGCGATGCTG 2508120 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC---AATTCACAGCTCGCCT 106187 | || || | | || ||||||| ||||| |||| ||| |||||| || | Sbjct 2508121 GTGAGCCTTGGTAAGTTTCATAGGGACCTT---CTTCCGCCGCTAATTCAATTGATGCTT 2508177 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 | | | || ||||| || |||||||| || || ||||| ||| | ||||| | | Sbjct 2508178 CAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGG 2508237 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 |||||||| || | | | |||||| |||| || | ||||| |||||||| ||| Sbjct 2508238 AATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAA 2508297 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGT 106364 | |||||||||| ||| || || || | ||| ||| || || || | |||| | Sbjct 2508298 TTGGTCTGTGTCTCATGTTTGA---TCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGAT 2508354 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 ||||||||| || | ||| ||||||| || |||| ||||| | || ||| | | Sbjct 2508355 CAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGT 2508414 Query 106425 -----CAAAAGTGCG----AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 ||| ||| | || ||| | | | | || | || || || |||| Sbjct 2508415 TGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAA---GGTAAAGCAATCGAAGCCA 2508471 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || |||||||| ||||| | | || || | |||||| ||||||||||| Sbjct 2508472 AGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGG 2508531 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 || ||||| |||||||| |||||||| ||| |||| || ||||||||||| | Sbjct 2508532 AAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACA 2508591 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGG 106655 |||| | || || || ||||| || |||| || | || | | ||||| | | Sbjct 2508592 ACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAG 2508651 Query 106656 CTGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 || | | || | || || | || || |||||| || || | | |||| Sbjct 2508652 CT--TTGATTGTCTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAA 2508709 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 106773 || ||||| | || | | ||| || | | |||| |||| | | ||| | Sbjct 2508710 TTCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATC 2508769 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 |||| | |||||| | ||||| || | ||||| ||||||| | || || | || Sbjct 2508770 ACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTC 2508829 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 |||| | | ||||| | ||| ||||| || | |||| ||| || | |||||| Sbjct 2508830 TCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATC 2508889 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 106949 ||||||||||| |||||||| | || | || || || | | ||| |||||| Sbjct 2508890 AGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGAT 2508948 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 ||||| || || ||| ||| || || |||| ||||||||||||||||| ||| || Sbjct 2508949 CCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTAC 2509008 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 | || || || || | | ||| | | | ||||| |||| ||||||| Sbjct 2509009 CGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATAC 2509068 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | ||||| | ||||| || ||||| | | | ||| |||| ||||| | || | Sbjct 2509069 CACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAG 2509128 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 107189 | || || || | || | | ||| ||| ||||| || ||| |||| ||||| |||| Sbjct 2509129 AATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCAT 2509188 Query 107190 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCA 107249 |||| | ||| | | ||| | || | ||| |||||| | ||| ||||| | Sbjct 2509189 TGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAA 2509248 Query 107250 AGAC----AGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTAT 107305 || | || || |||| || ||||| || || || || | ||||| || || | Sbjct 2509249 TAACTCTTGGGAT--ATCTCTT--CCATGGATACCAATAGCAACTCTCATAATCAAGTGT 2509304 Query 107306 TGGGGTGTTTC 107316 || ||| |||| Sbjct 2509305 TGTGGTCTTTC 2509315 Score = 114 bits (126), Expect = 2e-20 Identities = 350/531 (66%), Gaps = 29/531 (5%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||| ||||| || |||| | |||||| || ||| | ||| Sbjct 2634269 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2634210 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | || | |||||||||||| |||| | ||| || || || ||| ||||| Sbjct 2634209 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCA-AACGATCCACTGAAAAAGAT 2634151 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA----GGAGCGAGACTTTGTGT 117448 |||||| ||| ||||| |||| | | ||| || || | | || || | | | Sbjct 2634150 ACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCG-GAATCT---T 2634095 Query 117449 CAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 117508 || |||| | || ||||| | |||||||| | ||| || | |||| || || | Sbjct 2634094 GAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCAT 2634035 Query 117509 CAAATAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGA 117563 ||||| | ||||| || | |||||| || || | ||||||||| ||| Sbjct 2634034 TGAATAAGAAATCGGCTTCCTT-----TGGATCCTTGATATAAGTTTCAATCAATAATGA 2633980 Query 117564 ATATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTT 117622 ||| ||||| ||||| ||| ||| || | ||| | | || ||||| |||| Sbjct 2633979 ATAAGTTTCTGAATGAATGTTTTCCATCAT-GATTTGGAAACCATAAAATGATTTGGCTT 2633921 Query 117623 CGCTTATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 117682 | || || |||||| | | ||| || | | || ||| |||||| ||||| | Sbjct 2633920 CAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAG 2633861 Query 117683 ACCCAGCAAAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCAGGGT 117740 | |||| || || |||| || | ||| ||||| | ||||||| ||||||| | Sbjct 2633860 AGGCAGCGAAAAAGGCCAAGA--TTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTT 2633803 Query 117741 CT---TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 || |||| || | ||||||||| ||||||| |||||| |||||||| Sbjct 2633802 CTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCA 2633752 Score = 89.7 bits (98), Expect = 6e-13 Identities = 218/326 (67%), Gaps = 11/326 (3%) Strand=Plus/Plus Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336 ||||||| |||||||| || ||| ||||| || | || ||| | ||| ||||| | Sbjct 2814214 TATCAAACCCATCCATTTCAACCAATAGTTGATTCAATGTAGTTTCTCTTTCGTCATTAG 2814273 Query 9337 CTG-----GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAA 9391 || |||| | | | | | |||||| || | |||||| || || |||| || Sbjct 2814274 CTCCTGTTGCATTTCCCTTGGAT--CTTTGCTTACCAATGGCATCGATTTCGTCAACAAA 2814331 Query 9392 GACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCC 9451 |||||| ||||| |||||| | || | | || | ||| || || | | ||| || Sbjct 2814332 CACAATAGATGGTGCATTTTCCCTTGCAGTCTTGAATAAATCACGCACACGTGAGGCACC 2814391 Query 9452 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT-GAAGGGGACATTA 9509 ||||||||||||||| || || || | | |||| ||| | || || || || | Sbjct 2814392 CACACCAACAAACATTTCAACGAATTCGGAACCGGATACA--GAATAAAACGGAACGCCA 2814449 Query 9510 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9569 | ||| || || ||||| |||||| | |||||||| || || ||| || | || Sbjct 2814450 GCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTTACCTGTTCCCGGCGGCCCTGAAAGA 2814509 Query 9570 AGGGCACCCCGTGGAATCTTGGCGCC 9595 | ||||| || || |||||||| || Sbjct 2814510 ATAGCACCACGGGGGATCTTGGCACC 2814535 >seq14 Length=365783 Score = 107 bits (118), Expect = 2e-18 Identities = 187/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 155030 TGCCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTA 155089 |||| | |||| ||||||||||| ||||| || || || || ||||| || ||||||| Sbjct 51561 TGCCTATTGGTACATATGGTCGTGTGGCACCTCGTTCGGGGCTTGCTGTCAAACATGGTA 51502 Query 155090 TTCAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCT 155149 || | |||||| ||||| ||||| | || ||| ||||||||| ||||| || | | Sbjct 51501 TTTCAACTGGTGCAGGTGTCATTGACGCTGATTATCGAGGTGAAGTTAAAGTTGTCTTGT 51442 Query 155150 TCAATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCC 155209 |||| || || || ||||||| || || || || ||| | || || ||| | || Sbjct 51441 TCAACCATTCTGAAAAGAACTTTGATGTTAAAAAGGGCGATAGAATTGCTCAATTGGTTT 51382 Query 155210 TTGAGCGCTGTGAAACACCCGATGTGGAGGAAATT-----GGTGTTCTTGAAGAG-ACAG 155263 | || | || | | ||| | || |||||| || |||| ||| || | Sbjct 51381 TAGAAAGAATTGTTAATGCTGATATTGAAGAAATTACTGAGGAAGCATTGACGAGCACTG 51322 Query 155264 AGAGAGGTGCGGGTGGATTTGGATCTACTGG 155294 || |||||| |||||||||||||| || || Sbjct 51321 AGCGAGGTGAAGGTGGATTTGGATCCACAGG 51291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980512384360