Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq39 163 3e-35 >seq39 Length=2831396 Score = 163 bits (180), Expect = 3e-35 Identities = 212/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 158408 GTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGAT 158467 |||||| || ||| || || |||||| | ||||| || ||| ||||| | |||| Sbjct 1510878 GTGAGTTTGGCGCTGATATCGCCTTAGGTACTTCACAAAGATTCGGTGTTCCTTTTGGAT 1510819 Query 158468 ACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTG 158527 | || ||||| ||||||||||||||||| || | |||||||| ||||| ||||||| Sbjct 1510818 ATGGTGGTCCCCATGCTGCATTCTTTGCCACTTCCCACAAGTATGCCAGAAAAATACCTG 1510759 Query 158528 GCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTAC 158587 | |||||||| || ||| |||||| ||||| ||| | |||||||| | | Sbjct 1510758 GAAGAATTGTTGGGGTCTCAAAAGATAGATTGGGTAAACCAGCTTTGAGATTAGCTTTGC 1510699 Query 158588 AGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAG 158647 | |||||||| || ||||||| |||||| ||||| || || || |||||||| |||| Sbjct 1510698 AAACTAGAGAACAACATATCAAAAGAGAGAAAGCTACATCAAATATTTGCACAGCTCAAG 1510639 Query 158648 CACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGA 158700 | | ||||||| || || | |||||| | |||||||| |||| ||| Sbjct 1510638 CTTTATTGGCTAACATTTCAGCAAACTATGCCGTTTATCATGGACCAGAAGGA 1510586 Score = 111 bits (122), Expect = 2e-19 Identities = 261/384 (68%), Gaps = 10/384 (3%) Strand=Plus/Minus Query 159383 AAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGA 159442 ||||||| | ||| | || |||| || || ||||| || || ||||||||||||| | Sbjct 1509891 AAAGAAACATTTGTCTTATTCCAGTCTCTGCTCATGGTACCAACCCTGCATCAGCAGCAA 1509832 Query 159443 TGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAG 159502 || || |||||||||| ||||| ||| || |||| || ||| | |||| Sbjct 1509831 TGTGCGGATTGAAAGTTGTTCCAGTCAAATGTTTAGACAATGGTTCTATTGACTTGAAAG 1509772 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACAT-TTG--AAC-TGTCATGTATTATGATTACA 159558 || | || |||||| || | || |||| || ||| ||| | || ||||| || Sbjct 1509771 AT-TTGA-AAGAAA--AAGCTGAAAAACATGCTGCTAACTTGTGTTCAATCATGATCACT 1509716 Query 159559 TATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCAT 159618 |||||||| || |||| | |||||| | | | | | | | | ||||||||| Sbjct 1509715 TATCCATCCACTTATGGATTGTTTGAACCGGGTGTAAAAGAAGCAATTGACATTGTTCAT 1509656 Query 159619 GAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCA 159678 |||||||||| ||||| | |||||||| || | |||||||| || ||| || || Sbjct 1509655 CAGAATGGTGGGTTAGTATACTTGGATGGTGCTAACATGAATGCACAAGTTGGTTTAACA 1509596 Query 159679 AAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738 || |||| | ||||| ||||| ||||| | || | |||||||| || || ||| Sbjct 1509595 TCCCCTGGTGATTTAGGTGCTGATGTTTGTCACTTGAATATCCATAAGAC-TTTTGCATT 1509537 Query 159739 -CCACATGGAGGTGGAGGTCCTGG 159761 ||||| ||||| || ||||| Sbjct 1509536 GAGTCATGGTGGTGGTGGACCTGG 1509513 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| || |||| || ||| || || ||| ||||| || || ||||| || ||| Sbjct 1511421 TTATTGGAAAAGGTTATGCTGGTACGATTTTACCACCAGTGATTCAAAGAAAC-TTGTTG 1511363 Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 | | | || |||||||| || || || || |||||| | ||||| ||||| || || Sbjct 1511362 GAACTGCCAGAGTGGTACACTTCGTATACCCCATATCAACCAGAGATTTCTCAAGGTCGA 1511303 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 ||| || ||| || || || ||||| | || ||| | ||||| | || ||| Sbjct 1511302 TTGCAAAGTTTGTTAAACTATCAAACCATGATTACATCCTTAACAGGTTTGGACATGGCA 1511243 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 |||||||| |||| ||||||| || || || || || |||||| Sbjct 1511242 AACGCATCATTATTGGATGAAGGTACCGCTGCTGCTGAGGCAATG 1511198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050913325040