Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq39 403 2e-107
>seq39
Length=2831396
Score = 403 bits (446), Expect = 2e-107
Identities = 641/911 (70%), Gaps = 9/911 (1%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || || | ||||||||||||||||||||| || || || | || || |||
Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||||||||||||||| | ||||| || | ||||||| || || | | | |
Sbjct 2634503 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2634444
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| ||| || || ||||||| || |||| ||||| | |||||||||||| | ||
Sbjct 2634443 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2634384
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|||| || | |||||| |||| ||||||| ||| || | ||||| || | |||||
Sbjct 2634383 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2634324
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969
| |||| | | | | ||| | | | | ||| ||||| ||| |||||||||
Sbjct 2634323 CTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCAAAA 2634264
Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029
||| |||| || || || | || ||||||||||| ||||| || || || |||||
Sbjct 2634263 TCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGCATT 2634204
Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089
| |||||| || || |||||||| || |||||||| |||||| || || ||||| ||
Sbjct 2634203 AATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCCTCA 2634144
Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATTT 19148
|| || ||||||||||| | ||| || || ||| | ||||| || ||||||||| |
Sbjct 2634143 ACAGCAGCAAAAGCAACCAATCTCTCAGCA-AACAATGCATCGGAATCTTGAATCCATCT 2634085
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
| |||||||||||||||||||| | || || || || |||| ||| |||| | |
Sbjct 2634084 GATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA-AGA 2634026
Query 19209 CATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
|| || || | || ||| || | ||| | || |||||||| || |||||||||
Sbjct 2634025 AATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGAAT 2633966
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
|||| ||||| || || || || || ||||| || | ||||| | || || ||||
Sbjct 2633965 GAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAACTT 2633906
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
|| | |||| |||| ||||| ||||||||||| || |||||| || || ||||| |
Sbjct 2633905 CAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAAGG 2633846
Query 19388 CTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT-AATGTAT---TCCAATCATTA 19443
| || | | ||| ||| |||||| || || ||| | | ||||||||| |
Sbjct 2633845 CCAAGATTCTTCCAATGAAAAACCTTTCAT-TGTCATTCAATTTCTCTCTCCAATCATGA 2633787
Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503
| ||||||| |||||| | |||||| | ||||| || || || || || || || |||
Sbjct 2633786 AGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTAC 2633727
Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTA 19563
|| | ||| || ||| | ||| |||||||| || ||| | | | ||| ||||| ||
Sbjct 2633726 ATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGTTTTCCTTC 2633667
Query 19564 AGAATAGGTTC 19574
| || |||||
Sbjct 2633666 AAAAGTGGTTC 2633656
Score = 304 bits (336), Expect = 1e-77
Identities = 1178/1854 (64%), Gaps = 55/1854 (3%)
Strand=Plus/Plus
Query 47019 AAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAAT 47078
|| || |||||||| |||||||| ||| |||||||||| || ||||| || || |||
Sbjct 2507583 AAGTAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAAT 2507642
Query 47079 TTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCA 47138
||| | || ||| || ||||| || | ||||| || || || ||||||
Sbjct 2507643 TTACCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCA 2507702
Query 47139 CCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAA 47198
||||||||| |||||||| | ||| | |||| | || ||||| || ||||| ||
Sbjct 2507703 GCTCTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTAC 2507762
Query 47199 ATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTCCgttttctata 47255
| | || || || ||||| | || | | |||||| || || |||| |||
Sbjct 2507763 AATGCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATA 2507822
Query 47256 attttgttttttaat---tcatttgaccaaagttttcgttcagttaatgtttttaaAAGA 47312
|| | | || | ||||| ||||| | | ||| || ||| || |
Sbjct 2507823 ATGCTACTCTTCATAGCGTCATT---CCAAATTCCTAAATCAACCAAATCTTTCAACAAG 2507879
Query 47313 TGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTA 47372
| ||||||||||||||||| || |||| | ||||| | || ||||| ||
Sbjct 2507880 TATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTG 2507939
Query 47373 TATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGAT 47432
||||| || | | ||||||| || || |||||||| | || || || |||||||| |
Sbjct 2507940 TATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGA 2507999
Query 47433 GCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAA 47492
|| || || ||| ||||| | || | ||| | || | ||||
Sbjct 2508000 GCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAA 2508059
Query 47493 TCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATC 47552
||||| | || | ||| ||||| || || ||||| | | |||| |
Sbjct 2508060 TCCCACAATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCT 2508119
Query 47553 GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCC 47612
|| || || | || |||| ||| ||||| | | || | |||| ||||||
Sbjct 2508120 GGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCA 2508179
Query 47613 AATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGAT 47672
| ||| || ||| ||||||||||| |||| || || | | ||| |||||| ||
Sbjct 2508180 ACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAA 2508239
Query 47673 TCAAAAG-GATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAAT 47731
||||| ||| |||| ||| ||||| ||||| ||||| | ||||
Sbjct 2508240 TCAAATCCGAT-TCTCAAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAAT 2508298
Query 47732 TGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTAT 47791
|||||| || | | || || ||||||||| || | ||| || | |||| ||| ||
Sbjct 2508299 TGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAAT 2508358
Query 47792 AATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAAT---C 47848
| | |||| | | |||| || | | | || || | |
Sbjct 2508359 GACTCTATTCAAATTACGTGTA---------ACAACTTTGGTGACGTCATGCAACTTGTC 2508409
Query 47849 AAACTTGTTAT-----TTATAACAAACCT-----ATTAA-----GT---GCTATAGATGC 47890
||| |||| | | || | ||| || || || || || || ||
Sbjct 2508410 AAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGC 2508469
Query 47891 TAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATT 47950
| ||||| ||||| || |||| ||| | ||||| | |||||| ||| | ||
Sbjct 2508470 CAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTT 2508529
Query 47951 ACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTA 48010
| |||| ||| ||||||||||| || || ||||||| || ||||||||
Sbjct 2508530 GGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTA 2508589
Query 48011 AAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT 48070
| ||| || || || ||||| || | || | || | ||| || | ||| | |
Sbjct 2508590 CAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTG 2508649
Query 48071 AGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAA 48130
||| || || |||| | | || | |||||||| ||| |||| ||||
Sbjct 2508650 AGCTTTGATTGTCTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAA 2508709
Query 48131 TTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATC 48190
||| || ||||| || | | || ||| |||||| ||| | | ||||| ||||||
Sbjct 2508710 TTCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATC 2508769
Query 48191 CTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATC 48250
||| | | ||||| ||||||| | |||||| ||||| | |||| || || ||
Sbjct 2508770 ACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTC 2508829
Query 48251 CCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATC 48310
|||| ||| | |||||| || ||| ||| || ||| ||||| ||||| | |||||
Sbjct 2508830 TCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATC 2508889
Query 48311 AGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATC 48370
||| ||||||||||| | ||||| || | ||||||||| || ||||| ||||||||
Sbjct 2508890 AGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATC 2508949
Query 48371 TATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACC 48430
| ||| | ||||| ||||| |||| | | |||||| | |||||||||||| ||||
Sbjct 2508950 CACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACC 2509009
Query 48431 ATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATAC 48489
||||| || | || || ||| | | | || || || || ||| || ||||
Sbjct 2509010 GTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAAT-CCAATAC 2509068
Query 48490 CACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATAC 48549
|||| || |||| || || | ||||| || | || |||||||| ||||| |||
Sbjct 2509069 CACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAG 2509128
Query 48550 TATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAAT 48609
||| ||| |||| | | |||||| |||||||| || | ||| || | ||
Sbjct 2509129 AATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCAT 2509188
Query 48610 TAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAA 48669
| || || |||||| ||||| |||| || | | || | ||| || || || ||||
Sbjct 2509189 TGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAA 2509248
Query 48670 TAACAGAATCT----ATATCCCATTGATGTATACCTATAGATACACGCATTAACATATAT 48725
|||| ||| ||||| | | ||| ||||| |||| || | ||| | || | |
Sbjct 2509249 TAAC----TCTTGGGATATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGT 2509304
Query 48726 TGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTA 48785
|| ||||||||| ||| ||| ||| || || | ||||||| | ||||| |||||
Sbjct 2509305 TGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTG 2509364
Query 48786 AAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTA 48837
|| ||||| || ||||| ||||| || |||| || ||||| ||| ||||
Sbjct 2509365 AATCCAAAGTAATTGTAGTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2509416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108525971960
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