Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3 232 5e-55 seq39 219 3e-51 seq5 201 9e-46 seq13 190 2e-42 seq16 176 4e-38 seq15 95.1 1e-13 >seq3 Length=625561 Score = 232 bits (256), Expect = 5e-55 Identities = 326/453 (72%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG-TTTGGCAAAATGGTA 550049 |||| | ||||| ||||||||||||||||| |||||| | | ||| ||||| || || Sbjct 73838 AGCTGTTGGTATTGATTTAGGAACCACATACTCTTGTGTGGCTCATTTCGCAAA-TGATA 73780 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||| | |||| Sbjct 73779 GAGTTGAAATTATTGCTAATGACCAAGGTAACAGAACTACACCATCTTTTGTTGCATTCA 73720 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 | || |||||| ||| ||||||||||||| || ||||||| || || ||| ||| Sbjct 73719 CTGATACTGAAAGGTTAATTGGTGATGCAGCCAAGAATCAAGCTGCTATCAACCCTGCCA 73660 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| |||| |||||||||||||||||||| |||| ||| ||||| | ||||| Sbjct 73659 ACACTGTTTTCGATGCTAAACGTTTAATTGGTAGAAAATTTGATGATCCAGAAGTTCAAA 73600 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 ||||| ||||||| || ||| || || || | ||| ||||| | ||| ||| Sbjct 73599 ATGATATCAAGCATTTTCCATTCAAAGTTATTGACAAGGGTGGTAAACCAAACATTCAAG 73540 Query 550290 CTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | |||| || || ||| ||| | |||||| |||| ||||| |||||| Sbjct 73539 TTGAATACAAAGG---TG-AAACCAAGGTTTTTACCCCAGAAGAAATCTCATCCATGGTT 73484 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || | |||||||| || || | ||| | ||| |||| ||||| || Sbjct 73483 TTGGTTAAAATGAAGGAAGTTGCTGAAGGTTTCTTGGGTGGTACTGTTAAAGATGCTGTT 73424 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAA 550438 | ||||| ||||| || ||||| || || ||| Sbjct 73423 GTTACTGTTCCAGCTTACTTTAACGATTCTCAA 73391 >seq39 Length=2831396 Score = 219 bits (242), Expect = 3e-51 Identities = 341/484 (70%), Gaps = 14/484 (3%) Strand=Plus/Minus Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||||||||||||||| |||||||||||| ||||| |||| ||| |||| || Sbjct 1179765 AGTTGAAATTATTGCCAATGAACAAGGTAACAGAGTCACTCCTTCTTTTGTCGCTTTTAC 1179706 Query 550111 G-GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 | | || ||| | |||||||||| || || ||||||| || || || | | Sbjct 1179705 TAGTGAAGAAAGATTGA-TTGGTGATGCTGCCAAGAATCAAGCTGCTTTGAACCCAAAAA 1179647 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| ||||||||||||| ||||||||||| ||| |||| ||||| | ||||| Sbjct 1179646 ACACTGTTTTTGATGCTAAGCGTTTAATTGGTAGAGCTTTTGATGATGAATCCGTTCAAA 1179587 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 ||||| ||| ||||| ||| | || || |||| |||| |||| | ||||| | Sbjct 1179586 AGGATATCAAGTCATGGCCATTCAAGGTTATTGATGTCAATGGACAACCACAAATTGAGG 1179527 Query 550290 CT--ACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGG 550343 | | | || | || || ||| ||||| ||| || |||| || || |||| Sbjct 1179526 TTGAATACTTGGATGA------AACCAAGACTTTTTCCCCACAAGAAATCTCTTCAATGG 1179473 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 |||| | || ||||| ||| || ||| ||||| || | ||| | || | Sbjct 1179472 TTTTGACCAAGATGAAGGAAATTGCTGAAGCTAAAATTGGTAAAAAGGTTGAAAAAGCCG 1179413 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||| ||||| || ||||||||| | ||| | |||||||| || |||||||| Sbjct 1179412 TTATCACTGTCCCAGCTTACTTTAATGACGCTCAAAGACAAGCTACCAAGGATGCTGGTG 1179353 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | || ||| | | |||||||||||||| ||||||||||| |||| | Sbjct 1179352 CCATTGCTGGTTTGAACGTTTTGAGAATTATCAATGAACCAACTGCTGCTGCCATTGCCT 1179293 Query 550524 ATGG 550527 |||| Sbjct 1179292 ATGG 1179289 Score = 158 bits (174), Expect = 1e-32 Identities = 260/370 (70%), Gaps = 14/370 (4%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| |||||||| || || | | || |||||||||||||| ||| ||||| Sbjct 1179047 AGAACTGCTTGTGAAAGAGCAAAGAGATCATTGTCTTCTGGTACTCAAACAACTGTTGAA 1178988 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG--AGGGCCAAATTTG 552027 | || || || ||||| || |||| | |||| || || || || | ||| | Sbjct 1178987 ATTGACTCTTTGTTTGATGGTGAAGATTTC--TCCGCCAATATCACCAGAGCTAGATTCG 1178930 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 ||||||| | ||| | | || | || | |||||||| ||||||||||| | | Sbjct 1178929 AAGATATCAATGCTGCTTTGTTCAAGTCTACTTTGGAACCAGTTGAACAAGTTTTGAAGG 1178870 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 || | ||| || | || || |||| ||||| |||| ||||||||||| || || |||| Sbjct 1178869 ATGCCAAGGTTAACAAGTCTCAAGTTGATGAAGTTGTCCTTGTTGGTGGTTCAACCAGAA 1178810 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGT-TCTTATTTCAATGGTAAAAAATT----AAATGA 552202 |||| ||| ||| || |||| | ||| ||| |||||||| |||| |||| | Sbjct 1178809 TTCCAAAAGTTCAAAAATTGTTGTCTGACTTCTTT-GATGGTAAACAATTGGAAAAATCA 1178751 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | || || ||||| |||||||| |||||||| || |||||| ||||| | | Sbjct 1178750 A----TCAACCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGGTGCTATCTTGAC 1178695 Query 552263 TGGACAAACT 552272 ||| ||| || Sbjct 1178694 TGGTCAATCT 1178685 >seq5 Length=686942 Score = 201 bits (222), Expect = 9e-46 Identities = 392/570 (69%), Gaps = 18/570 (3%) Strand=Plus/Minus Query 368596 TCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAA 368655 ||||||| |||| |||||| || ||||| ||| | ||| |||||| ||||||| Sbjct 172202 TCAAGAAACAGGTATTGGGGTACGCCAATCCCAATTTGGGTCAGTGATGACTTTGAAGAA 172143 Query 368656 ATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGT 368715 ||||||||||| || |||||| | |||||| | ||||| || || | | |||| | Sbjct 172142 ATTGTTTGTATTGGATCAATTGACGAATTGAAGGAATTGTCAGGCAGAGACGACATTACT 172083 Query 368716 GATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTA 368775 ||| | ||| ||| | |||||| ||| |||||||| || || || |||||| Sbjct 172082 GATATCCATCGTGAAAGTATTGATTCTGTTACCATTCCATCCAAAAAGGGTAAAGGTGAG 172023 Query 368776 TTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGG- 368834 ||| || |||||| ||| || ||||| ||||||||||| |||||||||||||||| Sbjct 172022 TTGAAGAGAATTGAAGAAGTGTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCA 171963 Query 368835 TCAAATACATTATCCATTTGATA--ACGCAAAATACTTTGATAATGATAAAGATTATGTG 368892 ||||| ||||||||||||||| | | ||||| | || || ||| ||| Sbjct 171962 TCAAA-ACATTATCCATTTGAAAATAAGCAAA--AGTTCCATGATG-----CATT-CCCA 171912 Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 || | ||| | | ||| | ||||| ||| | |||||||||||||| | |||| Sbjct 171911 GCAAACTTTATTTCTGAAGGTTTAGATCAGACAAGAGGTTGGTTTTATACATTGACAGTA 171852 Query 368953 TTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTT 369012 || || | | ||| | | | | ||| | ||||||| || || |||||||| ||| Sbjct 171851 TTGGGAACTCATTTGTTCAACACAGCTCCTTATGAAAATGTTATCGTTACTGGTATCGTT 171792 Query 369013 AATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATT 369072 || | |||||| | |||||||| ||| || | || ||| | ||||| | | | Sbjct 171791 TTAGCTGCCGATGGTAAGAAGATGTCCAAACGTTTGAAAAACTATCCTGATCCAACTTTA 171732 Query 369073 TTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTG-TCA--TCACCTGTA 369129 | | || || | |||||||||| | |||||||| ||| ||| ||| ||||| ||| Sbjct 171731 GTCTTGGACAAGTATGGTGCTGATGCATTGAGATTGTAC---TTGATCAACTCACCAGTA 171675 Query 369130 GTAAAAGCAGAATCTATTAAATTTGATGAA 369159 | | ||| ||| | | || ||| | ||| Sbjct 171674 TTGAGAGCTGAAACCTTAAAGTTTAAAGAA 171645 >seq13 Length=1114083 Score = 190 bits (210), Expect = 2e-42 Identities = 442/661 (67%), Gaps = 26/661 (4%) Strand=Plus/Plus Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151 ||||||||| || || |||| | |||||||| ||||||||||| || || |||||||| Sbjct 726869 AAAGATTGACAAGTCACAAGTTGAAGAAATTGTCCTTGTTGGTGGTTCAACCAGAATTCC 726928 Query 552152 TAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGTGT 552208 ||| ||| || || | ||| ||||| ||||||||| |||| || | | | Sbjct 726929 AAAAGTTCAAAAATTGGT---TTCCGATTTCTTCAATGGTAAAGAATTGAACAAGTCTAT 726985 Query 552209 TAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA 552268 || |||||||| |||||||| || ||||| || | ||||| || || | | || | Sbjct 726986 CAACCCAGATGAAGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCCATCTTGACCGGTGA 727045 Query 552269 AACTG-ATGAAAAACTACAAAATAT--TGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 ||| || || || ||| |||| ||| ||| |||||| |||| | || | || Sbjct 727046 CACTTCATCCAAGACC-CAAGATATCTTGTTGTTG--GATGTTGCTCCATTGTCATTAGG 727102 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | ||||| | ||| ||||| ||||| || | || |||||| ||||||| || Sbjct 727103 TATTGAAACTGCTGGTGGTATCATGACCAAATTGATTCCAAGAAATGCTACTATCCCAAC 727162 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || || || || || ||| | ||||| ||| | | ||| |||||| | Sbjct 727163 CAAGAAGTCCGAAACCTTCTCCACCTATGCTGATAACCAACCAGGTGTCTTGATTCAAGT 727222 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG----GTACTTTTAATT 552501 |||||||| |||||| || || || || ||||||| ||| || | | Sbjct 727223 GTTTGAAGGTGAAAGAGCCAAGACCAAGGACAA----CAACTTGTTGGGTAAATTCGAAT 727278 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 || |||||||| || || || | || || || ||||| ||||||||||| ||||||| Sbjct 727279 TATCTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATCGAAGTTACTTTTGATATCG 727338 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATA 552621 |||||||||| || |||||||| |||||| || || || | |||| | |||| | Sbjct 727339 ATGCCAATGGTATCTTGAATGTTTCTGCTTTGGAAAAGGGTACCGGAAAGACTCAAAAGA 727398 Query 552622 TTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACGTATGGTCGAAG 552681 |||| | || |||||||| | | ||| | ||| || ||||| | | Sbjct 727399 TTACCATCACCAACGATAAAGGTAGATTATCCAAAGAAGATATTGAAAAGATGGTTAACG 727458 Query 552682 AAGCTAAAGAATTTGAAGAAGCTGATAATAAGAGAAAATCTGCT---GTCGATGCCAAGA 552738 ||||| || | || | |||| ||| | || | || ||||| ||| | ||||||| Sbjct 727459 AAGCTGAAAAGTTCAAGGAAGAAGATGAAAA---AGAAGCTGCTAGAGTCCAAGCCAAGA 727515 Query 552739 A 552739 | Sbjct 727516 A 727516 Score = 187 bits (206), Expect = 2e-41 Identities = 177/226 (78%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||||||||||||||||| |||||||| | | ||| | | Sbjct 725909 AGCTGTCGGAATTGATTTAGGAACCACATACTCTTGTGTTGCTCACTATGCAAACGACAG 725968 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||| | ||||| Sbjct 725969 AGTTGAAATTATTGCTAATGACCAAGGTAACAGAACTACACCATCTTTTGTTGCATTCAC 726028 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || |||||| ||| |||||||||| || || ||||||| || || ||| |||| Sbjct 726029 TGATACTGAAAGATTAATTGGTGATGCTGCCAAGAATCAAGCTGCTATCAACCCTGCCAA 726088 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGAT 550216 ||| |||| |||||||||||||||||||| |||| ||| ||||| Sbjct 726089 CACTGTTTTCGATGCTAAACGTTTAATTGGTAGAAAATTTGATGAT 726134 Score = 116 bits (128), Expect = 3e-20 Identities = 270/406 (67%), Gaps = 12/406 (3%) Strand=Plus/Plus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 |||||| |||||||| ||||| || | |||||||| ||||||| | ||| ||| |||| Sbjct 341930 TGTTAACCCAGATGAAGCTGTCGCTTTGGGTGCCGCCATTCAAGGTGGTATCCTTGCTGG 341989 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 |||| || || || | || | | ||||||||||| | || | || Sbjct 341990 ---------TGAAGT--TA-AAGATGTCGTTTTGTTGGATGTTACTCCATTGTCCTTGGG 342037 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | ||||| | || ||| || | ||| | || | |||||| || |||||||| Sbjct 342038 TATTGAAACCATGGGTGGTGTTTTCGCTAGATTGATTGCTAGAAACACCACTATTCCAGC 342097 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || ||||| | | || || || || | | ||||| | ||| ||| | | Sbjct 342098 CAAGAAATCACAAATTTTCTCAACTGCATCTGCTGGACAAACCTCGGTTGAAATCAGAGT 342157 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 ||| |||| |||||| |||| || | ||| || || |||||| |||| || Sbjct 342158 TTTCCAAGGTGAAAGAGAATTGACCAGAGACAACAAGTTGATTGGTAACTTTACCTTGTC 342217 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 ||||||||| || || || || || || ||||||||||| |||||||| || ||| | Sbjct 342218 AGGTATTCCACCAGCACCAAAAGGTGTTCCACAAATTGAAGTCACTTTCGACATTGATAC 342277 Query 552566 CAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAG 552611 |||| || | || || ||||| |||||||| || ||||||| Sbjct 342278 TGATGGTATCATTAAGGTTTCTGCTCGTGATAAAGCTTCCAACAAG 342323 >seq16 Length=199547 Score = 176 bits (194), Expect = 4e-38 Identities = 419/623 (67%), Gaps = 14/623 (2%) Strand=Plus/Plus Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 ||||| | || || || |||| || ||||||| | || |||| || ||||||| Sbjct 111116 TTGAAATTGACTCCTTTGTTGATGGTATTGATTTTTCAGAAACTCTTTCTAGAGCCAAAT 111175 Query 552025 TTGAAGATATTTGTTCTGATCTCTTT-AGAAAAACAATTGAA-CCAGTAGAACAAGTTTT 552082 ||||||| ||| || || || ||||| || ||||| ||||| ||||||||||| Sbjct 111176 TTGAAGA-ATTAAACATGGCTTCATTCAGAAAGACC-TTGAAGCCAGTTGAACAAGTTTT 111233 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| || || | || ||| | | |||| ||||| | |||||||| || || Sbjct 111234 GAAGGATGGTAATGTTAAAAAGTCCGATATTGATGATATTGTCTTGGTTGGTGGTTCCAC 111293 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 ||||||||| ||| ||| ||| | || | || ||| | ||| ||||| | Sbjct 111294 AAGAATTCCAAAAGTTCAAGAATTATTGGAACAATTCTTTGA-TGGCAAAAAGGCATCCA 111352 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 || || ||||||||||||| |||||||| |||||||| || ||||||||| | | | Sbjct 111353 AAGGTATTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCAGGTGTCTTGA 111412 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATCT 552320 ||| ||| ||| | | ||||||| |||| | ||||| | ||| | || Sbjct 111413 GTGG------TGAAGAAGGTGTCGATGATATTGT-CTTGTTGGATGTCAATCCATTGACT 111465 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 | ||| | ||||| || ||| ||||||| | | | || |||||||| ||||| Sbjct 111466 TTGGGTATTGAAACTTCAGGTGGTGTTATGACCACTTTGATTAGAAGAAATACCGCTATT 111525 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || || || |||| | || || || | | ||||| ||| | ||||| |||| Sbjct 111526 CCAACCAAGAAGTCTCAAATTTTCTCCACTGCTGCTGATAACCAACCAACTGTTTTAATT 111585 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 ||| ||| ||||| ||||||| | | | ||||| || || | | |||| || | Sbjct 111586 CAAGTTTACGAAGGTGAAAGAACAATGGCCAAAGACAACAACAGATTGGGTAAATTCGAA 111645 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || |||||||| || || || | || || || ||||||||||| || ||| | | Sbjct 111646 TTGACTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATTGAAGTCACATTCTCTTTG 111705 Query 552561 GATGCCAATGGAATTTTGAATGT 552583 ||||||||||| || ||||| || Sbjct 111706 GATGCCAATGGTATCTTGAAAGT 111728 Score = 159 bits (176), Expect = 3e-33 Identities = 370/552 (67%), Gaps = 18/552 (3%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| || || ||||| || || || || |||||||||||| | | ||||| ||||| Sbjct 110292 TATTGGAATCGATTTGGGTACTACGTACTCATGTGTTGGTGTTATGAAGAATGGAAAAGT 110351 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||| | ||||| ||||||||||| |||| |||||||| |||||| | |||| | Sbjct 110352 TGAAATACTAGCCAACGATCAAGGTAATAGAATAACTCCATCGTATGTTGCATTCAATGG 110411 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 |||| || |||||||| ||||| ||| ||||||| || ||| | ||| || Sbjct 110412 TGATGAAAGATTGGTTGGTGACGCAGCCAAAAATCAAGCTGCTTCCAATGTCAACAACAC 110471 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | |||||| ||| | || ||||| || | ||||||| |||||||| || Sbjct 110472 AGTGTTTGATATCAAAAGATTGATTGGCTTAAAGTATAATGATGACACTGTTCAAAAGGA 110531 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAA---ACC--TTATA----T 550284 |||||||| ||| | | | |||| || || || ||| || || | Sbjct 110532 ATTGAAGCATATGCCATACAAGATTGAAAA---CAAGGGCAACAGACCGGTTGTATCTGT 110588 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 |||| ||| ||| | | ||| ||| |||||||| ||||||| |||| | Sbjct 110589 TGAA--TAC-AATGGCGAA---CAAAAAGTATTCACACCAGAAGAAATTTCGGGTATGAT 110642 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| ||| ||||| || || | | ||||| | ||||||| | || || Sbjct 110643 TTTGGGGAAGATGAAGTCAATCGCTGAGGAGTACCTTGGTAAGAAAGTTACCCACGCTGT 110702 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | ||||| ||||| || |||||||| | ||| | ||||| ||||| |||||||| Sbjct 110703 TGTCACTGTTCCAGCCTACTTTAATGATGCCCAAAGACAAGCAACTAAGGATGCTGGTAC 110762 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||||||| | || ||| | | ||| | |||||||| || || || || |||| || Sbjct 110763 TATTGCTGGTTTAAACGTTTTGAGAATTGTTAATGAACCAACAGCCGCCGCTATTGCCTA 110822 Query 550525 TGGACTTGATAA 550536 |||| | || || Sbjct 110823 TGGATTGGACAA 110834 >seq15 Length=2091020 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2074822 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2074881 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2074882 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATT 2074941 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || ||||| || | ||||| | Sbjct 2074942 GTCAATAGTGTCTGA-TGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGA 2075000 Query 563462 CGAAAATTTGCATA 563475 |||||||||||||| Sbjct 2075001 CGAAAATTTGCATA 2075014 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2075050 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2075109 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2075110 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATT 2075169 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || ||||| || | ||||| | Sbjct 2075170 GTCAATAGTGTCTGA-TGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGA 2075228 Query 563462 CGAAAATTTGCATA 563475 |||||||||||||| Sbjct 2075229 CGAAAATTTGCATA 2075242 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2075278 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2075337 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2075338 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATT 2075397 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || ||||| || | ||||| | Sbjct 2075398 GTCAATAGTGTCTGA-TGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGA 2075456 Query 563462 CGAAAATTTGCATA 563475 |||||||||||||| Sbjct 2075457 CGAAAATTTGCATA 2075470 Score = 95.1 bits (104), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2075506 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2075565 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2075566 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATT 2075625 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || ||||| || | ||||| | Sbjct 2075626 GTCAATAGTGTCTGA-TGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGA 2075684 Query 563462 CGAAAATTTGCATAGACATCTTGGTT 563487 ||||||||||||| | | ||||||| Sbjct 2075685 CGAAAATTTGCATTGTGA-CTTGGTT 2075709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293937504110