Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq39 230 3e-55 >seq39 Length=2831396 Score = 230 bits (254), Expect = 3e-55 Identities = 595/896 (66%), Gaps = 32/896 (4%) Strand=Plus/Minus Query 36823 TTTTTTAAAAATCTTCATCTAACGTAAATTTTATT----TCCTTATT---ACTATT---C 36872 ||||||| ||||||||||| || | ||| | ||| || ||||| ||| || | Sbjct 2634634 TTTTTTAGAAATCTTCATCAAATGCAAAATC-ATTGGCATCTTTATTTTCACTCTTGGCC 2634576 Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932 || || || ||||| || || ||||| | |||| || ||||| ||||| || | Sbjct 2634575 ATGACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCC 2634516 Query 36933 AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACAT 36989 | || ||||| |||||||||||||||||||| | ||| || | | | ||| Sbjct 2634515 AAGGAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC 2634456 Query 36990 GATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAG 37049 || | || | || || ||||||||||| | |||| |||||| | | | | Sbjct 2634455 ---AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAA 2634399 Query 37050 TTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACA 37109 || || || | | | ||||| | |||||| || ||| |||||| ||| || Sbjct 2634398 TTCATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACT 2634339 Query 37110 GCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATTTAA 37167 || || ||| || | ||| || |||| | | || ||| || |||| || Sbjct 2634338 GCTTCAGTAATAATTCTTTCAACAA--TCTTTGGGTCAGGTCTATGTTGTAAATGAGCAA 2634281 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 |||| || |||||||||||| |||||||||||||| | || ||||||||||| |||| Sbjct 2634280 ACAACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAA 2634221 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 |||| |||||||||||||| ||||| || || | ||| || || | ||||| |||||| Sbjct 2634220 AGGTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCAC 2634161 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 || || ||||| ||||| || ||||| || || | | | | || || | Sbjct 2634160 TGAAAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGG 2634101 Query 37348 AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA---ATTGTTT 37404 |||| ||||||| | | | |||||| ||||| ||||| || | || |||| Sbjct 2634100 AATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAA---TTTGAGGGATGGTTT 2634044 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || || | || | ||| | ||| | |||||||| ||||| | || Sbjct 2634043 CAATAGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATA 2633984 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | ||| |||| || ||||| ||||| || || || ||||||||||| | | | Sbjct 2633983 ATGAATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGG 2633924 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | |||||| || | |||| | | | |||||||||||||| || |||| Sbjct 2633923 CTTCAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCAT 2633864 Query 37585 CACTAGCTGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGAT 37640 || || || || || | ||||| | | || ||| |||||| ||||| || Sbjct 2633863 CAGAGGCAGCGAAAAAGGCCAAGATTCT-TCCAATGAAAAACCTTTCATTGTCATTCAAT 2633805 Query 37641 AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 | | ||||||||| || |||||| |||||||| ||| || | ||||| || Sbjct 2633804 TTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAA 2633749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316511245560