Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq39 230 3e-55
>seq39
Length=2831396
Score = 230 bits (254), Expect = 3e-55
Identities = 595/896 (66%), Gaps = 32/896 (4%)
Strand=Plus/Minus
Query 36823 TTTTTTAAAAATCTTCATCTAACGTAAATTTTATT----TCCTTATT---ACTATT---C 36872
||||||| ||||||||||| || | ||| | ||| || ||||| ||| || |
Sbjct 2634634 TTTTTTAGAAATCTTCATCAAATGCAAAATC-ATTGGCATCTTTATTTTCACTCTTGGCC 2634576
Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932
|| || || ||||| || || ||||| | |||| || ||||| ||||| || |
Sbjct 2634575 ATGACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCC 2634516
Query 36933 AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACAT 36989
| || ||||| |||||||||||||||||||| | ||| || | | | |||
Sbjct 2634515 AAGGAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC 2634456
Query 36990 GATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAG 37049
|| | || | || || ||||||||||| | |||| |||||| | | | |
Sbjct 2634455 ---AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAA 2634399
Query 37050 TTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACA 37109
|| || || | | | ||||| | |||||| || ||| |||||| ||| ||
Sbjct 2634398 TTCATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACT 2634339
Query 37110 GCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATTTAA 37167
|| || ||| || | ||| || |||| | | || ||| || |||| ||
Sbjct 2634338 GCTTCAGTAATAATTCTTTCAACAA--TCTTTGGGTCAGGTCTATGTTGTAAATGAGCAA 2634281
Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227
|||| || |||||||||||| |||||||||||||| | || ||||||||||| ||||
Sbjct 2634280 ACAACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAA 2634221
Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287
|||| |||||||||||||| ||||| || || | ||| || || | ||||| ||||||
Sbjct 2634220 AGGTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCAC 2634161
Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347
|| || ||||| ||||| || ||||| || || | | | | || || |
Sbjct 2634160 TGAAAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGG 2634101
Query 37348 AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA---ATTGTTT 37404
|||| ||||||| | | | |||||| ||||| ||||| || | || ||||
Sbjct 2634100 AATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAA---TTTGAGGGATGGTTT 2634044
Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464
|||| || || || | || | ||| | ||| | |||||||| ||||| | ||
Sbjct 2634043 CAATAGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATA 2633984
Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524
| ||| |||| || ||||| ||||| || || || ||||||||||| | | |
Sbjct 2633983 ATGAATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGG 2633924
Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584
|||||| | |||||| || | |||| | | | |||||||||||||| || ||||
Sbjct 2633923 CTTCAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCAT 2633864
Query 37585 CACTAGCTGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGAT 37640
|| || || || || | ||||| | | || ||| |||||| ||||| ||
Sbjct 2633863 CAGAGGCAGCGAAAAAGGCCAAGATTCT-TCCAATGAAAAACCTTTCATTGTCATTCAAT 2633805
Query 37641 AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
| | ||||||||| || |||||| |||||||| ||| || | ||||| ||
Sbjct 2633804 TTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAA 2633749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316511245560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |